Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00987 ATGCTGGTGGAATGTAGAGCTGGCGAACTGTCTGCTGCTGAGCTCGACAACCTCATGACGGTTGTCGCAAATCCTTGCCAATTTAAGATTCCTGATTGGTTTTTGAACAGAAAGAAGGATTACAAGGATGGAAAACATTCTCAGGTTGTGTCCAACGCATTGAATATGAAACTGAGGGATGACCTTGAGCGTTTGAAGAAGATCAGTGTGATTTGTTGGCAATAA 225 0.4311 MLVECRAGELSAAELDNLMTVVANPCQFKIPDWFLNRKKDYKDGKHSQVVSNALNMKLRDDLERLKKISVICWQ* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00987 74 PANTHER 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 5 70 - -
Pte7g00987 74 Pfam Ribosomal protein S13/S18 5 69 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Pte7g00987 74 PIRSF RPS13p_RPS13a_RPS18e_RPS13o 1 73 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Pte7g00987 74 Gene3D 30s ribosomal protein s13, domain 2 43 72 IPR027437 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00987 Pte-Chr7 34601850 34602257 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00987 6 68 Cytoplasmic Ribosomal Protein Gene Family AT4G09800 90.476 3.49e-38 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00987 K02964 - qsu:112019340 121.324