Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00982 ATGAGTTCAAACCCTAGTAGCAGTAGTGGTGGACCATGTGGAGCATGCAAGTTCTTAAGGAGGAAGTGTGTACCGGGTTGTATATTTGCGCCATACTTTGATTCAGAACAAGGGGCAGCACATTTCGCAGCTGTGCATAAGGTTTTCGGGGCCAGCAATGTCTCTAAGCTGCTTCTACATATTCCAGTTAACAAGAGACTTGATGCAGTGTTAACCATATGTTATGAAGCACAGGCAAGGCTTAGAGATCCTGTTTATGGCTGTGTTGCTCACATCTTTACTCTTCAACAACAGGTAGTGAGTCTACAAGCAGAACTTTCATGCTTACAAGCCCATCTTACCACATTAGAGGTACCTACACCTACACCTCCGCCACCTCCGCCACAAACTATAATAACGCAAACACCATTATCAATTGCAGACCTTACCTCAGCTACTAATTCTGTGCCATCTACATATGATCTGTCTTCAATTTTTGAACCAATGACTCAAACTTCATGGGGCGTGCAACGGTCCATTGACCCACATCAATTTGGTGGTGCTAGCAGCGGTGGTGGTGGAGGTGGAGGCCCATCATTGACCAGGGGTGGCAATGGTGGCGGTGATCTTCAAGCATAA 618 0.4612 MSSNPSSSSGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPVNKRLDAVLTICYEAQARLRDPVYGCVAHIFTLQQQVVSLQAELSCLQAHLTTLEVPTPTPPPPPPQTIITQTPLSIADLTSATNSVPSTYDLSSIFEPMTQTSWGVQRSIDPHQFGGASSGGGGGGGPSLTRGGNGGGDLQA* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00982 205 MobiDBLite consensus disorder prediction 172 205 - -
Pte7g00982 205 ProSiteProfiles LOB domain profile. 11 113 IPR004883 -
Pte7g00982 205 PANTHER LOB DOMAIN CONTAINING PROTEIN 8 138 - -
Pte7g00982 205 Pfam Lateral organ boundaries (LOB) domain 12 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00982 Pte-Chr7 34505310 34507893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00982 15 205 AS2 family AT4G00220 64.103 2.24e-75 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte7g00982 LOB 5.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00982 K21994 - rcu:8270648 269.626