Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00980 ATGGAAATCACAAATGGTTGTGATATTATGGAGAGTGTTTCAAATTTTGCAAGGAGAAGACAACGTGGGATTTGCATTTTAAGTGGTACTGGGACGGTAACTAATGTCAATCTCAGACAACCAGCTTCACCTGGTTCTGTTGCGACCTTACATGGAAGATTTGAGATATTATCCTTGTCTGGGTCTTTCTTACCACCGCCTGCACCGCCTGCGGCATCAGGATTGTCCATATATCTAGCTGGAGGACAAGGCCAGATGGTCGGAGGAAGCGTGGTTGGACCGTTATTGGCTTCTGGTCCGGTGGTTGTCATGGCTGCTTCATTTGGTAATGCAGCCTATGAGAGGCTTCCTTTGGACGAAGAAGAGGGATCTGTCGCAGTTGCTGGAAGTGGTGGAGGGTTAGGGTCACCTGGAACGGTAGAACAGCAGAAGCAGCATAGCGAGCAGCAGCAACAGCTTTTGCCTGATCCTAACACATCTCTCTTTCATGGTGTGCCACAAAATTTTCCGAGTTCATGTCAATTGGCAGGTGAAGGAGGTTATTGGGGTGGAACTGCAGGCCGCCCACCTTATTAA 576 0.4844 MEITNGCDIMESVSNFARRRQRGICILSGTGTVTNVNLRQPASPGSVATLHGRFEILSLSGSFLPPPAPPAASGLSIYLAGGQGQMVGGSVVGPLLASGPVVVMAASFGNAAYERLPLDEEEGSVAVAGSGGGLGSPGTVEQQKQHSEQQQQLLPDPNTSLFHGVPQNFPSSCQLAGEGGYWGGTAGRPPY* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00980 191 PIRSF ESCAROLA 1 191 IPR014476 GO:0003680
Pte7g00980 191 SUPERFAMILY AF0104/ALDC/Ptd012-like 2 122 - -
Pte7g00980 191 MobiDBLite consensus disorder prediction 136 167 - -
Pte7g00980 191 ProSiteProfiles PPC domain profile profile. 1 130 IPR005175 -
Pte7g00980 191 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 157 IPR014476 GO:0003680
Pte7g00980 191 Gene3D - 1 127 - -
Pte7g00980 191 FunFam AT-hook motif nuclear-localized protein 1 123 - -
Pte7g00980 191 Pfam Plants and Prokaryotes Conserved (PCC) domain 1 109 IPR005175 -
Pte7g00980 191 CDD DUF296 2 108 IPR005175 -
Pte7g00980 191 MobiDBLite consensus disorder prediction 125 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00980 Pte-Chr7 34476594 34477169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00980 1 183 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 66.839 2.92e-55 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00980 - - qsa:O6P43_027103 254.603