Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00955 ATGGCTATCCCTATCTCAACCAAGGCCTTAGGCTGCTTTCTCTTCTGCTCCTTCCTTGTTTCTTCTTTCTCCACCTTTTCTCTTGCTCTTACAGATGTTGAAGCCTCCCTCATTGCTAGCAAACAACGTCGTTCATTGACAGAAAACAAGGGTGAGCTTCCTCCAAATTATGAACAGGAGGTTGACGTTAAGGAAACCTTCCCCAGTGAAAGGCTTCGTAGAGCCTTCATTGCTCTTCAAGCATGGAAAAAAGCAGTCTACTCTGACCCTAAGAATATGACTGGCAATTGGGTTGGTGCAAATGTTTGTGACTACCATGGTGTCTTCTGCACTCAAGCTCTTGATGATCCCAAGCTGATGGTGGTTGCTGGTGTTGATCTCAACCATGGTGACATTGCTGGATATCTTCCTGTTGAGTTAGGGCTTTTGACTGATTTGGCATTGTTTCATTTGAACTCCAACAGGTTTTGTGGTATTCTCCCGAAAAGCTTGTCAAAGCTTAACCTCATGCATGAGTTTGACATCAGCAACAATCGTTTCGTGGGTCCTTTCCCTTATGTTGTTCTTCAATGGCCTAAGATTAAATACCTTGACATTAGGTTTAATGATTTTGAAGGGAAATTGCCACCTGAGCTTTTCAAGAAAGAGCTTGATGCAATTTTCTTGAATAATAACCGTTTCAGATCTGTGATTCCCACAACAATTGGCAAATCCAAAGCTTCAGTGATCACATTTGCGCACAACAAATTCACTGGCTGCATTCCGAACTCAATTGGCGAAATGGTGGGGTTGAATGAGATTGTCTTCCTAGGAAATGACCTCAAAGGTTGCTTCCCACAAGAGCTTGGATTGCTTGGCAATTTGACATTGTTTGATGCTAGAAAGAATGGGTTGGTTGGTGTTCTGCCTAAGACATTGTCTGGATTGAAGAGTGTGCAGGTCCTAGACATTTCTAATAATAAGCTAACAGGATATGTGCCAGACAGTGTTTGCAAGTTGCCCAGCTTGTTAAATTTCACTCTCTCTGACAATTACTTCAGTGGGGAGGCTCAAGCTTGCTTGGCAATGGCATCTAAGAAAGCTAAAGTTGTGTTTGATGATGACAGCAACTGTTTGCCTGGACGAAGACATCAGAAGAGTTCAAAGAAATGCTTCCCTGTTGTGGCTAAACCTGTGGACTGCAACAAGCAATGTGGTGCCAATCCAACACCAAAGCCAACTCCCAAACACAAGAGTCATCCACTGAAGCCTGAAACACCAAAATCTAAGCCACAACCAACTCCAAAGGCAAAACCACCTCCAAGTCCGAAAGCCGAGCCTCCTGCATCATCACCTGACCCGGCTGGTGGATTGCCGGTCACACCAGTTCGTCAAAGTCCACCACCAGTTCACTCCCCTCCTCCAAGTCCGAAAGCTGAGCCACCAAAAGCACCAGAGGCCCCTGCACCATCGCCTGATTCATTTGCTGTATTGCCTGTGACACCAATTCGACGTCGCCATCCCCCACCTCCGCCACCAGCTCAATCACCCCCACCACCTGTGTTTTCACCTCCTCCACCAACACCAGTTCAGTCTCCTCCACCATCTGTAAAGTCACCCCCGCCACCAGCGCCGGTTCAGTCTCCTCCGCCTCCTGTGCATTCCCCACCACCTGCACCAGTTCGGTCTCCTCCACCTCCTGTATATTCACCCCCACCACCAGTATACTCTCCTCCACCCCCTTCACCTGTACAATCTCCCCCTCCTCCAGTGTACTCACCACCACCTCCATCTCCTGTATATTCACCACCACCACCGGTGTACTCTCCCCCACCCCCTTCACCTGTCCAATCTCCACCACCTCCACCTGTACACTCACCTCCTCCACCACCTCCCGTTAAATCTCCACCTCCACCTGCACCAGTTTCCTCTCCTCCCCCACCTCCACCTGTACACTCACCTCCTCCACCAGTACACTCTCCACCTCCACCACCTCCCGTTAAATCTCCACCTCCACCTGCACCAGTTTCCTCTCCTCCACCACCAGTATTCTCTCCACCACCACCTACTACTTTATCTCCTCCTATTGTTTCTGCACCACCCCCAGTCTTTGACATTTACCTCCCACCAACCATTGGCGCCCAATACTCATCCCCACCTCCTCCAGTGTTCCAGGGCTACTAA 2163 0.4887 MAIPISTKALGCFLFCSFLVSSFSTFSLALTDVEASLIASKQRRSLTENKGELPPNYEQEVDVKETFPSERLRRAFIALQAWKKAVYSDPKNMTGNWVGANVCDYHGVFCTQALDDPKLMVVAGVDLNHGDIAGYLPVELGLLTDLALFHLNSNRFCGILPKSLSKLNLMHEFDISNNRFVGPFPYVVLQWPKIKYLDIRFNDFEGKLPPELFKKELDAIFLNNNRFRSVIPTTIGKSKASVITFAHNKFTGCIPNSIGEMVGLNEIVFLGNDLKGCFPQELGLLGNLTLFDARKNGLVGVLPKTLSGLKSVQVLDISNNKLTGYVPDSVCKLPSLLNFTLSDNYFSGEAQACLAMASKKAKVVFDDDSNCLPGRRHQKSSKKCFPVVAKPVDCNKQCGANPTPKPTPKHKSHPLKPETPKSKPQPTPKAKPPPSPKAEPPASSPDPAGGLPVTPVRQSPPPVHSPPPSPKAEPPKAPEAPAPSPDSFAVLPVTPIRRRHPPPPPPAQSPPPPVFSPPPPTPVQSPPPSVKSPPPPAPVQSPPPPVHSPPPAPVRSPPPPVYSPPPPVYSPPPPSPVQSPPPPVYSPPPPSPVYSPPPPVYSPPPPSPVQSPPPPPVHSPPPPPPVKSPPPPAPVSSPPPPPPVHSPPPPVHSPPPPPPVKSPPPPAPVSSPPPPVFSPPPPTTLSPPIVSAPPPVFDIYLPPTIGAQYSSPPPPVFQGY* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00955 720 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 15 599 - -
Pte7g00955 720 MobiDBLite consensus disorder prediction 419 482 - -
Pte7g00955 720 Gene3D Ribonuclease Inhibitor 76 244 IPR032675 -
Pte7g00955 720 Pfam Leucine rich repeat 288 345 IPR001611 GO:0005515
Pte7g00955 720 FunFam Pollen-specific leucine-rich repeat extensin-like protein 1 75 376 - -
Pte7g00955 720 PRINTS Proline rich extensin signature 413 434 - -
Pte7g00955 720 PRINTS Proline rich extensin signature 434 450 - -
Pte7g00955 720 PRINTS Proline rich extensin signature 476 501 - -
Pte7g00955 720 PRINTS Proline rich extensin signature 458 475 - -
Pte7g00955 720 PRINTS Proline rich extensin signature 399 411 - -
Pte7g00955 720 MobiDBLite consensus disorder prediction 496 700 - -
Pte7g00955 720 SUPERFAMILY L domain-like 80 352 - -
Pte7g00955 720 Gene3D Ribonuclease Inhibitor 245 375 IPR032675 -
Pte7g00955 720 MobiDBLite consensus disorder prediction 396 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00955 Pte-Chr7 34066054 34068216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00955 1 592 Trihelix Transcription Factor Family AT3G19020 52.365 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00955 - - qsa:O6P43_011664 580.482