Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00953 ATGTGTGTTGATCTTCGTGTAATGGAGAAGCACAAGTGTAAGCTTTGCTTCAAGAAATTCTCTAATGGCAGAGCTTTAGGGGGTCACATGAGGTCTCATATGATGAACCTTCCAATTCATCTGAAACGAGAAGATGCACCACCGCCACCACCGCTACAACCACCATCACTGGCAGCAGCTAGCCTTATCAGTGATGAGGTTGAGTCAGCTTCGTATTCATCTGAAGGAGATGATGGAGAAGGAGAGAAGGGTTTGAGTAATGGGCATAGAGAGAACCCAAAGCGAAGTATTCGCATGGTAGATCCTGAGTTTGCATTTGCTGTTGATCCTGGGTCTGTTGTTCTTCAAGATAGAGAGAGCGAAACAGAGTCTTCGAAGAACCCAACTCGAAGACGATCCAAAAGGATTAGGAAATCAGTTACCATGGAAGAAGATCAGCTCCGACATCAAAGCAAGCAAATTCACCTGAACCCCATGAAAAGGTTTCAAAATCTGATGAATTTCAGTAAAACTGAATCGTGGGCAGCAGAGCCTGAACCTGCGAGCTCGGTTTCTGATGCGCCAACAGAAGAAGATGTTGCATTTTGTCTTATGATGCTGTCTAGAGACAAATGGAAGAGACAAAAGCATCAGGTTGAGCAAGAACATCAACACGATCTTGATGATGATGATGATGATGAGCAAGACGACAAAGAGGAGGAGGAAGAAGCTGAACGATCCTTTGAAGAAAGTGATGAATCCGAGGAGCTGAAATCGACAAAGGCACGAGTACGAGGGAAGTACAAATGTGATACATGCAACAAAGTCTTTCGATCTTATCAAGCATTAGGTGGACACAGAGCAAGTCACAAAAAGATTAAGCTTTGTACCAGAATGACTGAACCAGAGTTGGAGCAAGAGAATGCAGCTGGTACTTCAGCTTCAATGACGGCAGAGAAGAAAATTCATCAGTGTCCAGTTTGTTTTAGAATTTTTTCATCAGGACAAGCATTAGGTGGGCATAAGAGAATCCATGTGATAGGTGCTTCAGCAAGTACACCAGTGAGGAACTCCGCTAAGTTTGGGGACAATTTGATAGATCTTAACCTTCCTGCTCCAGTCGATGATGACGATGATGATATTAGCCAGATTGAACTTTCCGCAGTGTCTGATGCATAA 1158 0.437 MCVDLRVMEKHKCKLCFKKFSNGRALGGHMRSHMMNLPIHLKREDAPPPPPLQPPSLAAASLISDEVESASYSSEGDDGEGEKGLSNGHRENPKRSIRMVDPEFAFAVDPGSVVLQDRESETESSKNPTRRRSKRIRKSVTMEEDQLRHQSKQIHLNPMKRFQNLMNFSKTESWAAEPEPASSVSDAPTEEDVAFCLMMLSRDKWKRQKHQVEQEHQHDLDDDDDDEQDDKEEEEEAERSFEESDESEELKSTKARVRGKYKCDTCNKVFRSYQALGGHRASHKKIKLCTRMTEPELEQENAAGTSASMTAEKKIHQCPVCFRIFSSGQALGGHKRIHVIGASASTPVRNSAKFGDNLIDLNLPAPVDDDDDDISQIELSAVSDA* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00953 385 ProSiteProfiles Zinc finger C2H2 type domain profile. 11 38 IPR013087 -
Pte7g00953 385 ProSiteProfiles Zinc finger C2H2 type domain profile. 316 338 IPR013087 -
Pte7g00953 385 Pfam C2H2-type zinc finger 261 285 - -
Pte7g00953 385 Pfam C2H2-type zinc finger 11 34 - -
Pte7g00953 385 Pfam C2H2-type zinc finger 316 338 - -
Pte7g00953 385 Gene3D Classic Zinc Finger 258 338 - -
Pte7g00953 385 ProSitePatterns Zinc finger C2H2 type domain signature. 13 33 IPR013087 -
Pte7g00953 385 MobiDBLite consensus disorder prediction 110 150 - -
Pte7g00953 385 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 8 385 IPR044303 GO:0006355
Pte7g00953 385 SMART c2h2final6 11 33 IPR013087 -
Pte7g00953 385 SMART c2h2final6 261 283 IPR013087 -
Pte7g00953 385 SMART c2h2final6 316 338 IPR013087 -
Pte7g00953 385 MobiDBLite consensus disorder prediction 65 97 - -
Pte7g00953 385 SUPERFAMILY beta-beta-alpha zinc fingers 10 38 IPR036236 -
Pte7g00953 385 SUPERFAMILY beta-beta-alpha zinc fingers 261 338 IPR036236 -
Pte7g00953 385 MobiDBLite consensus disorder prediction 208 254 - -
Pte7g00953 385 MobiDBLite consensus disorder prediction 218 243 - -
Pte7g00953 385 ProSitePatterns Zinc finger C2H2 type domain signature. 318 338 IPR013087 -
Pte7g00953 385 MobiDBLite consensus disorder prediction 76 97 - -
Pte7g00953 385 ProSiteProfiles Zinc finger C2H2 type domain profile. 261 288 IPR013087 -
Pte7g00953 385 ProSitePatterns Zinc finger C2H2 type domain signature. 263 283 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00953 Pte-Chr7 34040863 34042020 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00953 8 374 C2H2 Transcription Factor Family AT3G60580 37.368 2.58e-62 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte7g00953 zf-C2H2_6 5.9e-13 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00953 - - qsa:O6P43_017371 400.208