Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00949 ATGGAAAGTGATGCTCAAGACAACTTGGTTGCCTCATCTTCCTTCCTTATTAGCATTTCTTCTTCCTCCTCCTCATTAGCAACGTCTTCTTCTCCTTCAACCTCAGTTTCTAAAGTTTCGTCAGAATTAGAAAACGACGACAAGTGTAACAAAAGGAAGAGAAGTGAGACTGATAGCAAGCATCCAACATACAGAGGAGTAAGAATGAGAGCTTGGGGGAAGTGGGTGTCTGAAATTCGTGAACCAAGAAAGAAGTCAAGGATATGGCTCGGTACATACCCTACAGCTGAAATGGCAGCCAGAGCACATGATGTGGCTGCTTTGACCATCAAAGGTAACAACGCTTATCTCAATTTTCCTCATTTGGCTCAAGAGCTTCCACGACCAGTGAGTAAATCTCCTAAAGACATTCAAGAAGCTGCTGCTAAAGCTGCAGCCACCATGTTCGATGATGCTAAAGAACTTGCTGGGGTTAAAGGTGAAGGGGGGACCAGTCAAGCGGAGGTTACAACTTCATCGTCAAATTTGTCTTTGGACAACAGTCAAGAACCATCAACAAGCTCACCTTCCGTTGATGACAGTGATGATGCATTGTTTGACTTACCAGATCTTTTCACTGATGTAAATGATGGACTCATCATCAACTACTCATTCTCATGGCATTTGTGTTGTGCAGCTGAAACTGGTTTTAGATTTGAGGAGCCCTTCTCGTGGGAGAGCAACTAG 726 0.438 MESDAQDNLVASSSFLISISSSSSSLATSSSPSTSVSKVSSELENDDKCNKRKRSETDSKHPTYRGVRMRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALTIKGNNAYLNFPHLAQELPRPVSKSPKDIQEAAAKAAATMFDDAKELAGVKGEGGTSQAEVTTSSSNLSLDNSQEPSTSSPSVDDSDDALFDLPDLFTDVNDGLIINYSFSWHLCCAAETGFRFEEPFSWESN* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00949 241 Gene3D AP2/ERF domain 63 121 IPR036955 GO:0003700|GO:0006355
Pte7g00949 241 MobiDBLite consensus disorder prediction 41 62 - -
Pte7g00949 241 Pfam AP2 domain 62 112 IPR001471 GO:0003700|GO:0006355
Pte7g00949 241 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 41 207 - -
Pte7g00949 241 ProSiteProfiles AP2/ERF domain profile. 63 120 IPR001471 GO:0003700|GO:0006355
Pte7g00949 241 MobiDBLite consensus disorder prediction 158 193 - -
Pte7g00949 241 MobiDBLite consensus disorder prediction 22 40 - -
Pte7g00949 241 MobiDBLite consensus disorder prediction 22 62 - -
Pte7g00949 241 CDD AP2 64 122 IPR001471 GO:0003700|GO:0006355
Pte7g00949 241 SMART rav1_2 63 126 IPR001471 GO:0003700|GO:0006355
Pte7g00949 241 SUPERFAMILY DNA-binding domain 63 121 IPR016177 GO:0003677
Pte7g00949 241 MobiDBLite consensus disorder prediction 164 193 - -
Pte7g00949 241 FunFam Ethylene-responsive transcription factor 2 62 121 - -
Pte7g00949 241 PRINTS Ethylene responsive element binding protein signature 64 75 IPR001471 GO:0003700|GO:0006355
Pte7g00949 241 PRINTS Ethylene responsive element binding protein signature 86 102 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00949 Pte-Chr7 33977321 33978568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00949 51 236 AP2-EREBP Transcription Factor Family AT2G44940 55.340 1.04e-66 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte7g00949 AP2 6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00949 - - qsa:O6P43_017345 236.498