Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00947 ATGGAAGGTAAGAAAAGCGAAGAGGGTACAAGAAAAGGGCCATGGAGAGCAGAAGAAGATGAAGTCCTTATAAACCATGTAAAGCAACATGGTCCAAGAGATTGGAGTTCCATTCGATCCAAAGGCCTTTTGCAAAGGACTGGCAAATCGTGTCGTCTTCGTTGGGTTAATAAGCTTAGGCCAAATTTGAAGAATGGGTGCAAATTTACTCCGGAGGAAGAGAGGCTGGTGATAGAGTTACAGGCACAATTTGGAAACAAATGGGCTAGGATAGCGACATATCTGCCAGGAAGAACAGATAATGACGTGAAGAATTTCTGGAGTAGCAGGCAGAAGAAGCAGGCTAGGATTCTTCAAAAAGCACCCACCAAGTCCCACGAGAACAAGAAATATGTCCCTGAGTCTCGTGATGTTCCTGCCTTGGAGATGCTTCTCTCTCAACAGTACTCGGAGGTGAAAGTGGAGATCCCTCTCAAGTTGGAAAGTCAAGAATTCTTCACTGGAGACTTCCTGAACTACATCGATGCTTTTGAAAATCTGGGGGATTCTGAACTTGGAGCCGAAACTCGATTTCCGATTGCACCTCAATTTTTTGAGCCATTTGGTAGTTTCAGAAATGGTTCCATGGAGATACTTGATAACTCTGCAGACCCTATTGGTTTCTTTGATGAATTTCCATTAAACATGTATGATCATATGGAGTCCCCTTCAAACCCTCCACCGTCACTGTGA 732 0.4399 MEGKKSEEGTRKGPWRAEEDEVLINHVKQHGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNLKNGCKFTPEEERLVIELQAQFGNKWARIATYLPGRTDNDVKNFWSSRQKKQARILQKAPTKSHENKKYVPESRDVPALEMLLSQQYSEVKVEIPLKLESQEFFTGDFLNYIDAFENLGDSELGAETRFPIAPQFFEPFGSFRNGSMEILDNSADPIGFFDEFPLNMYDHMESPSNPPPSL* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00947 243 Pfam Myb-like DNA-binding domain 15 65 - -
Pte7g00947 243 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Pte7g00947 243 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 55 IPR017930 -
Pte7g00947 243 ProSiteProfiles Myb-like domain profile. 7 59 IPR001005 -
Pte7g00947 243 FunFam Transcription factor GAMYB 67 137 - -
Pte7g00947 243 ProSiteProfiles Myb-like domain profile. 68 111 IPR001005 -
Pte7g00947 243 FunFam MYB transcription factor 12 64 - -
Pte7g00947 243 PANTHER TRANSCRIPTION FACTOR DUO1 4 140 - -
Pte7g00947 243 Pfam Myb-like DNA-binding domain 68 107 IPR001005 -
Pte7g00947 243 Gene3D - 12 64 - -
Pte7g00947 243 CDD SANT 14 59 IPR001005 -
Pte7g00947 243 CDD SANT 68 107 IPR001005 -
Pte7g00947 243 SMART sant 65 113 IPR001005 -
Pte7g00947 243 SMART sant 11 61 IPR001005 -
Pte7g00947 243 Gene3D - 67 137 - -
Pte7g00947 243 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 115 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00947 Pte-Chr7 33963997 33965299 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00947 1 119 MYB Transcription Factor Family AT3G60460 84.874 6.62e-70 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte7g00947 Myb_DNA-bind_6 6.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00947 K09422 - zju:107422649 246.128