Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00941 ATGAGTGAGAAGAATGATGAACTGAGGTTGAGCTTGAGTTTGGGATTAGGGGGAAATCAAAATCCTTTGAAGCGGAACCTCTTCATGGCTCCTCCACATGGCCGCAAGACTTCATGTAATGACATGGGGCACTTGTCTGATGCAGTTCCATCTCATGTATGCATGTCTTTCCTTAGAGGGATTGATGTGAATGCAGTTCCATCTCATGTAGATGGTGATGATGATACTGGGGCTTCTTCACCAAACAGCACTTTGTCTAGTATAAGTGGAAAACGTGCTGAGAGAGAGTCAAATGGTAATGAAAATGAAGGTGAAAGAGCTTCAACATCACATGGTGGAAGTGACGATGAAGATGGTAATGGTGGTTGTGACACTTCAAGGAAGAAGCTCAGGCTCTCTAAGGAGCAAGCCTTAGTGCTAGAAGAGACATTCAAGGATCATAGCACACTTAATCCTAAGAAAAAACAAGCATTAGCCAAGCAGCTGAATTTAATGCCTAGACAAGTGGAGGTGTGGTTTCAGAACAGAAGGGCAAGGACAAAGCTGAAGCAGACAGAAGTGGACTGTGAATACATGAAGAGACGCTGTGAGAATTTAACTACCGAAAACAGGAGATTGCAGAAAGAGGTGCAAGAGCTTAGAGCATTGAAATTATCTCCACAGCATTACATGCAAATGAATCCACCTACTACCCTTACAATGTGCCCTTCATGTGAGCGTGTTGCTGTTTCCTCATCATCTTCTGCAGCTGCTTCCTCCTCCATGACAGGTGCAAACTGCAGCCTAACCAGTCGGGATTTACAGCGGGCTATGCCCATAAGTCCATGGGCTTCTCTGCCGATACATCGCCGTCCATTTGATGCTCAATCTTCTCTACCATAA 882 0.4478 MSEKNDELRLSLSLGLGGNQNPLKRNLFMAPPHGRKTSCNDMGHLSDAVPSHVCMSFLRGIDVNAVPSHVDGDDDTGASSPNSTLSSISGKRAERESNGNENEGERASTSHGGSDDEDGNGGCDTSRKKLRLSKEQALVLEETFKDHSTLNPKKKQALAKQLNLMPRQVEVWFQNRRARTKLKQTEVDCEYMKRRCENLTTENRRLQKEVQELRALKLSPQHYMQMNPPTTLTMCPSCERVAVSSSSSAAASSSMTGANCSLTSRDLQRAMPISPWASLPIHRRPFDAQSSLP* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00941 293 MobiDBLite consensus disorder prediction 1 20 - -
Pte7g00941 293 SMART halz 183 226 IPR003106 GO:0006355|GO:0043565
Pte7g00941 293 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 9 255 - -
Pte7g00941 293 SMART HOX_1 125 187 IPR001356 GO:0003677
Pte7g00941 293 SUPERFAMILY Homeodomain-like 110 184 IPR009057 -
Pte7g00941 293 Coils Coil 182 216 - -
Pte7g00941 293 ProSiteProfiles 'Homeobox' domain profile. 123 183 IPR001356 GO:0003677
Pte7g00941 293 Pfam Homeodomain 127 181 IPR001356 GO:0003677
Pte7g00941 293 MobiDBLite consensus disorder prediction 94 127 - -
Pte7g00941 293 MobiDBLite consensus disorder prediction 68 127 - -
Pte7g00941 293 Gene3D - 112 187 - -
Pte7g00941 293 MobiDBLite consensus disorder prediction 75 93 - -
Pte7g00941 293 FunFam Homeobox-leucine zipper protein 18 111 188 - -
Pte7g00941 293 Pfam Homeobox associated leucine zipper 183 217 IPR003106 GO:0006355|GO:0043565
Pte7g00941 293 Pfam HD-ZIP protein N terminus 1 96 IPR006712 GO:0005634
Pte7g00941 293 CDD bZIP 176 215 - -
Pte7g00941 293 CDD homeodomain 127 184 IPR001356 GO:0003677
Pte7g00941 293 ProSitePatterns 'Homeobox' domain signature. 158 181 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00941 Pte-Chr7 33899047 33900618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00941 56 285 Homeobox Transcription Factor Family AT3G60390 67.480 2.57e-95 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte7g00941 HD-ZIP_N 6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00941 K09338 - qsa:O6P43_026962 342.043