Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00897 ATGGAAAAATCTCTCTCTCCTAAAGGAAAGGGTATAGAGTACTGTTGGGGATCGCCTAGACCGCAGTACGAGGGATTCACACCCTTTGATGTAGGAACAAGGAGCTCTATCCAAGAAGGCATGCTTAACAACCTTACAGAGCTTATGAATTTTGATAGTTATGCTGTTTTGTGTGATACCCCATCCTCTGCAGACCATGTTTTCGATAATGGGCTTCGGCCATGTTCAGTGGAACCACGTATTACCTCTGATGCCTTCAACTTTGCAGAGGACGGTAGTGAAGGATTCTTTGTTTCTGAATGGAATAGAAATTATCGTACTGTTGGAAGTTCAGTCAAAATTCAGCAAATTGATGCCCAAGGGGGGTTCTCAAATGATGCAGATAAAATAGAAGAAGAACAAGGCGATGATTTTTTTTGGCGAAATGGTAATTTAGATAGGGACGTTAGTATGATCTCTAGATCGCTGGGGTGGTCACTTGATGAAAGAATGTTGAAAGCTTTGTCCTTGTTTAAAGACTCAGCTGGCGGAGGCATTTTAGCCCAAGTCTGGGTTCCTATGAAACATGGAGATCATCACATCTTAACCACTATTGAGCAACCTTATTTACTAGATCAAGTGCTTGCTGGATTTCGTGAAGTCTCTAGGACATTTACATTCTCAGCAGAACAGAAACTAGGCTCTTTCCTAGGTCTTCCAGGTCGTGTTTTTAATTCCAAAATTCCTGAGTGGACTTCGGATGTAGGCTATTACAACAAGGCTGAGTATTTGAGGGTAGAGCACGCAATCAATCACCAAATTCACGGGTCTATTGCTATCCCTATAGTTGACCCTCACCATGACAAATCATGTTGTGCTGTCCTTGAACTTGTTACTACTAAACAAAAACCAAATTTTGATGGGGAGTTGCAATTGGTATGCTCTGCGCTGCAGGCAGTGAATCTCCAAACAAATGCAACTCCTAGACTTCTTCCTGAGTGTCTTTCAGACAATCAAAAAGCGGCATTAGCAGAAATAAGTGATGTCTTGAGAGCCGTGTGTCATGCACATAGATTGCCATTGGCACTGACATGGATTCCTTGTTACTACAATGAGGAGCTACCTAATGAGATCGAAAAAGTACGAATTCGGGGGGGTCAAACAAGTGATAGGGATAAAACCATACTATGCATTGATGAACCTGCTTGTTATGTGAATGATAGAGTGATGGAAGGAATTATTCATGCATGTCAAGAACATCATCTTAAAGAAGGACAGGGAGTGCCGGGGAAAGCTCTTCAGTCAAATCACTCTTTCTTCTGTCCGAATGTGAAGACATATGATATAGCTGAGTATCCACTTGTCCTCCATGCACGCAAATATGGTCTGAATGCTGCAGTTGCTATCAGACTGAGGAGCACGTATACAGACAATGATGACTACATATTGGAATTTTTTCTGCCCGTCAATATGACGGCAAGTGCACAACAAGAACTCTTGTTAGACAGCCTCTCATGTACCATGCGGAGGGTTTGTAGAAGTTTGAGGACAGTAACAGATGCTGAATTAGCTGGGATAGAAGGAGAACAAAGTATGTGGTTTCCAGAGGAAAAAGACCTTAGATTCCTGGGTATGTCTGCAGAAAACTGTCGGATAAAACCATCTGAGATTGACTGCAAAGCAGTCACAGAGATACCCATGAATCTATTGAGTAGCAGAAAGGATTGGAATGAAGCTGAATGCTCGTATGGCCAGGGGATCAGCAGAGAAAGAAGGCAGGTGGAGAAAAGAAGAAGTACAGCAGAGAAGAATGTCAGTTTAAGTGTTCTCCAGCAACATTTTTCTGGCAGCCTTAAGGATGCTGCAAAAAGCCTTGGCGTTTGTCCCACTACACTAAAAAGGATATGCAGACAACATGGCATTTCTAGGTGGCCCTCTCGAAAGATTAACAAAGTGAACCGATCATTAAAGAAAATTCAAACTGTGCTGGACTCTGTTCAGGGAGTTGAGGGAGGCTTGAAGTTCGATCCTGTCACAGGTGGTTTGGTTGCCGCAGGATCTTCTATTCTAGAATCTAATGAACAGAAAATGGATCTTCCTCTGCAGAAATCACAGCCTGTCTCCAATGGTGCTGTTTTAGCATCTCTGGGAGGTGGCAGCAGAAAAAAATTTGCAAGTAAGTTGGAAGAGAGTGGCTTTTGTATGGAAAGGAATGCATTTAGGAGATCACGGAGTGAGGTCAACCTAAACACTTCTGCTATTGACTACGAAGACTCTAAAACAATGACTGTAGATGATGGGAAACACAAGAAAATGAATTCTCTGAGAGATCCTTGGGCTTCTCCTCCGAATCCCTCGTTGGATTTTTGTCTTGCTACAAAGGAAGGTGACAAATGTGGGAAGGATAAGAGTCATTTGAGATTTGACAATTTTGACTGCGACTTAGTCACTCAGAGTTCAAGCTCTTTGGTTGGTACTGAAGAAATGGATATAGGGATTGATGGGGATAATAGACGTAACCAGCCAACCATTTCGTCCATGACTGACACATCAAATGAATCTCGTTCCTCAATGCATGGTTATTCTTCTAGCTCTCAGAGTTTCCAGGAGAGGAAGCCCTCAAAACCAAATGCAAACAGTGTTGACAGCGGGTCCAAGATTATAGTGAAAGCCACTTACAAAAATGATACCGTGCGTTTCAAGTTTGAGTCTTCTGCTGGTTATTTCCAACTGTATGAAGAAGTTGCTAAAAGGTTCAAGCTACAAAATGGTACCTTTCAGCTCAAGTATTTAGATGATGAAGGAGAATGGGTTATGTTAGTGAATGACTCAGATTTGGAAGAATGTGTAGAGATAATGGATGATGTTGGCACTCGCTCAGTGAAGCTCCTTGTTCGTGACGTGCCCTTTTCCTTGAGTAGTTCTGGTAGCAGTAGTCGCTTCTTGACAGGGAGCTCATAG 2940 0.4248 MEKSLSPKGKGIEYCWGSPRPQYEGFTPFDVGTRSSIQEGMLNNLTELMNFDSYAVLCDTPSSADHVFDNGLRPCSVEPRITSDAFNFAEDGSEGFFVSEWNRNYRTVGSSVKIQQIDAQGGFSNDADKIEEEQGDDFFWRNGNLDRDVSMISRSLGWSLDERMLKALSLFKDSAGGGILAQVWVPMKHGDHHILTTIEQPYLLDQVLAGFREVSRTFTFSAEQKLGSFLGLPGRVFNSKIPEWTSDVGYYNKAEYLRVEHAINHQIHGSIAIPIVDPHHDKSCCAVLELVTTKQKPNFDGELQLVCSALQAVNLQTNATPRLLPECLSDNQKAALAEISDVLRAVCHAHRLPLALTWIPCYYNEELPNEIEKVRIRGGQTSDRDKTILCIDEPACYVNDRVMEGIIHACQEHHLKEGQGVPGKALQSNHSFFCPNVKTYDIAEYPLVLHARKYGLNAAVAIRLRSTYTDNDDYILEFFLPVNMTASAQQELLLDSLSCTMRRVCRSLRTVTDAELAGIEGEQSMWFPEEKDLRFLGMSAENCRIKPSEIDCKAVTEIPMNLLSSRKDWNEAECSYGQGISRERRQVEKRRSTAEKNVSLSVLQQHFSGSLKDAAKSLGVCPTTLKRICRQHGISRWPSRKINKVNRSLKKIQTVLDSVQGVEGGLKFDPVTGGLVAAGSSILESNEQKMDLPLQKSQPVSNGAVLASLGGGSRKKFASKLEESGFCMERNAFRRSRSEVNLNTSAIDYEDSKTMTVDDGKHKKMNSLRDPWASPPNPSLDFCLATKEGDKCGKDKSHLRFDNFDCDLVTQSSSSLVGTEEMDIGIDGDNRRNQPTISSMTDTSNESRSSMHGYSSSSQSFQERKPSKPNANSVDSGSKIIVKATYKNDTVRFKFESSAGYFQLYEEVAKRFKLQNGTFQLKYLDDEGEWVMLVNDSDLEECVEIMDDVGTRSVKLLVRDVPFSLSSSGSSSRFLTGSS* 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00897 979 Pfam PB1 domain 882 960 IPR000270 GO:0005515
Pte7g00897 979 SMART PB1_new 879 961 IPR000270 GO:0005515
Pte7g00897 979 ProSiteProfiles RWP-RK domain profile. 584 665 IPR003035 -
Pte7g00897 979 MobiDBLite consensus disorder prediction 819 875 - -
Pte7g00897 979 PANTHER PROTEIN NLP8 133 972 IPR045012 GO:0003700
Pte7g00897 979 Pfam RWP-RK domain 597 645 IPR003035 -
Pte7g00897 979 Gene3D - 875 959 - -
Pte7g00897 979 MobiDBLite consensus disorder prediction 831 875 - -
Pte7g00897 979 SUPERFAMILY CAD & PB1 domains 872 961 - -
Pte7g00897 979 ProSiteProfiles PB1 domain profile. 879 961 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00897 Pte-Chr7 33387877 33394053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00897 1 975 NLP Transcription Factor Family AT2G43500 46.910 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Pte7g00897 PB1 3.2e-19 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00897 - - qsa:O6P43_000048 1047.34