Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00896 ATGCCTAAACAAATCCATGAAATCAAGGATTTCCTTCTCACTGCCAGAAGGAAAGATGCACGGTCTGTGAAGATTAAGAGGAGCAAAGGTGTTGTTAAATTCAAGGTTCGATGCTCCAAGTATCTCTATACACTTTGTGTGTTTGATTCTGAGAAGGCTGATAAGTTGAAGCAATCTCTTCCTCCAGGTTTGACTGTCGTAGACGTATGA 210 0.4095 MPKQIHEIKDFLLTARRKDARSVKIKRSKGVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLTVVDV* 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00896 69 Pfam Ribosomal L38e protein family 2 69 IPR002675 GO:0003735|GO:0005840|GO:0006412
Pte7g00896 69 Gene3D - 1 69 IPR038464 -
Pte7g00896 69 PANTHER 60S RIBOSOMAL PROTEIN L38 1 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
Pte7g00896 69 FunFam 60S ribosomal protein L38 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00896 Pte-Chr7 33376018 33377668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00896 1 70 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 90.000 7.42e-42 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00896 K02923 - gmx:100806030 132.88