Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00888 ATGGATAAGGACAAGTCCCCTGGACTTCCGCCTCCTTCTGGTCGTTATTCTAGTTTTTCTCCATCTGGGATTGGTAATTTCAATGTAAAATCAGAGACACCATCATCTTCATTTCCTCCACCTGCACCAATTGCTAATTCAGACTCCAGCCATTTTGGAAATGGGATGTCTATCGACTCCAGTGGCTTTAGCCATGATATCAGCGGAATGCCTGATAACCCTCCTAAGAATAGAGGTCATAGGCGTGCTCACTCAGAGATCCTCACTCTACCAGATGATATTAGTTTCGATAGTGACCTTGGTGTGGTGGGTGCTGGGGATGGGCCTTCATATTCTGATGAAACTGAGGAAGACTTGCTATCTATGTACCTTGATATGGATAAATTCAATTCTTCGTCTGCAACATCAACATTTCAAATGGGAGAACTGTCTGCTACCCTGCCAGCAGCTTTGGCGTCTGCATCCACTCCAACTTCGCAAGCATTTAACTCTGGTGTGGAAAGCGTTACGACCAGTGCTAATGGGAGGCCTAGAGTAAGACACCAGCACAGCCAGTCCATGGATGGTTCAACGACGATCAAATCTGAGATGCTTGTCTCTGGTTCGGAAGAGATGTCGGCTGCTGACTCTAAGAAGGCCATGTCAGCTGCTAAGCTTGCTGAGCTTGCTCTGGTTGATCCCAAACGTGCTAAAAGGGTATGGGCAAACAGGCAGTCAGCTGCGAGGTCAAAAGAGAGAAAGATGCGCTACATTGCTGAACTTGAAAGAAAAGTCCAGACCCTGCAAACGGAAGCTACATCTTTATCTGCTCAATTGACCCTACTTCAGAGAGATACAAATGGACTGACTGCTGAAAACAGTGAACTGAAGCTACGGTTGCAATCCATGGACCAGCAGGTTCACTTGCAGGATGCATTAAATGATGCATTGAAAGAGGAAATTCAGCATCTGAAGGTATTGACTGGTCAAACGATGCCAAATGGAACACCCTTGCTGAACTTTGGTGCTTCTTTTGGGGGTGGGCAGCAATTCTACCCCAGCAATCAAGCAACACATACCCTCTTAACTACTCAGCAGTTTCAACAACTCCAGATACACTCTCAGAAACAGCAGCAACAATTTCAGCAGCACCTCCAACATCAACAAGTGCAGCAGCAGGACTACACTGGAGACCTGAGAATGAGAGGATCTATGTCTTCTTCAAGCCAGAAGGAAACTGCCTCATCAAACGGGAACCCTTCGTCAGCAAATGATTCATAA 1260 0.4627 MDKDKSPGLPPPSGRYSSFSPSGIGNFNVKSETPSSSFPPPAPIANSDSSHFGNGMSIDSSGFSHDISGMPDNPPKNRGHRRAHSEILTLPDDISFDSDLGVVGAGDGPSYSDETEEDLLSMYLDMDKFNSSSATSTFQMGELSATLPAALASASTPTSQAFNSGVESVTTSANGRPRVRHQHSQSMDGSTTIKSEMLVSGSEEMSAADSKKAMSAAKLAELALVDPKRAKRVWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLTAENSELKLRLQSMDQQVHLQDALNDALKEEIQHLKVLTGQTMPNGTPLLNFGASFGGGQQFYPSNQATHTLLTTQQFQQLQIHSQKQQQQFQQHLQHQQVQQQDYTGDLRMRGSMSSSSQKETASSNGNPSSANDS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00888 419 SUPERFAMILY Leucine zipper domain 228 279 IPR046347 GO:0003700|GO:0006355
Pte7g00888 419 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 30 410 - -
Pte7g00888 419 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 226 289 IPR004827 GO:0003700|GO:0006355
Pte7g00888 419 SMART brlzneu 224 288 IPR004827 GO:0003700|GO:0006355
Pte7g00888 419 MobiDBLite consensus disorder prediction 393 419 - -
Pte7g00888 419 Gene3D - 227 279 - -
Pte7g00888 419 CDD bZIP_plant_RF2 229 278 IPR044759 GO:0003700|GO:0006355
Pte7g00888 419 MobiDBLite consensus disorder prediction 158 190 - -
Pte7g00888 419 MobiDBLite consensus disorder prediction 1 82 - -
Pte7g00888 419 MobiDBLite consensus disorder prediction 13 35 - -
Pte7g00888 419 FunFam probable transcription factor PosF21 227 280 - -
Pte7g00888 419 Coils Coil 244 278 - -
Pte7g00888 419 Pfam bZIP transcription factor 228 282 IPR004827 GO:0003700|GO:0006355
Pte7g00888 419 MobiDBLite consensus disorder prediction 42 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00888 Pte-Chr7 33311732 33315392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00888 15 355 bZIP Transcription Factor Family AT1G06070 71.345 9.14e-161 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte7g00888 bZIP_1 1e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00888 - - gmx:100786738 528.48