Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00883 ATGAAAATTCAGTGTGATGTATGTGAAAAGGCTCCAGCTACTGTGATCTGTTGTGCAGATGAAGCAGCTCTGTGTGCCAAATGTGATGTTGAGGTTCATGCAGCCAACAAGCTAGCTAGCAAGCATCAAAGGCTTCTTCTTCAGTGCCTATCAAATAAGCTTCCTAAATGTGATATATGCCAAGATAAGCCAGCATTCATTTTCTGTGTCGAAGACAGAGCTCTCTTTTGTCAGGACTGCGATGAACCAATTCATTCAGCCAATAGACTTTCTGTGAACCACCAGCGGTTCTTAGCTACAGGAATCAGAGTGGCTCTGAGTTCTAATTGCACCAATGGAACCGACAAGATTCATATGGAGCCGCCAAAACCAAATAGAAATTCAGACCAAATATCAATGGAAAATCCCTCACAGCAAGCATCTAGCTTTACATCACCTTGGGCGGTTGATGACCTGTTGCAGTTTTCAGATTTCGGTTCTCCTGACAAGAGAGAAGCTCTTGAGCAAGGAGAACTGGATTGGCTAGAAATGAGTCTTTTTGGGGAACAAATCCCTCGAGAAACCTTGGCCGCAGCTGAAGTCCCTCAGCTTCCACTGTCACTAACTAGCAATGTCACTTCATACAGAAGCCCCAAGCGGACCATGCCCTTCAAGAAACCTCGGATTGAAATTCGAGATGAGGATGATGAACATTTTACTGTTCCTGACCTTGGATGA 717 0.4449 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPKCDICQDKPAFIFCVEDRALFCQDCDEPIHSANRLSVNHQRFLATGIRVALSSNCTNGTDKIHMEPPKPNRNSDQISMENPSQQASSFTSPWAVDDLLQFSDFGSPDKREALEQGELDWLEMSLFGEQIPRETLAAAEVPQLPLSLTSNVTSYRSPKRTMPFKKPRIEIRDEDDEHFTVPDLG* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00883 238 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Pte7g00883 238 SMART bboxneu5 52 99 IPR000315 GO:0008270
Pte7g00883 238 SMART bboxneu5 4 47 IPR000315 GO:0008270
Pte7g00883 238 MobiDBLite consensus disorder prediction 125 142 - -
Pte7g00883 238 CDD Bbox1_BBX-like 5 47 - -
Pte7g00883 238 Pfam B-box zinc finger 52 95 IPR000315 GO:0008270
Pte7g00883 238 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
Pte7g00883 238 MobiDBLite consensus disorder prediction 207 238 - -
Pte7g00883 238 CDD Bbox1_BBX-like 56 98 - -
Pte7g00883 238 Gene3D Classic Zinc Finger 1 97 - -
Pte7g00883 238 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 237 - -
Pte7g00883 238 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Pte7g00883 238 MobiDBLite consensus disorder prediction 216 238 - -
Pte7g00883 238 MobiDBLite consensus disorder prediction 112 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00883 Pte-Chr7 33297828 33300720 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00883 1 163 Orphan Transcription Factor Family AT1G06040 64.881 6.37e-68 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Pte7g00883 zf-B_box 1.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00883 - - cave:132189631 382.874