Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00878 ATGGCTATGATGAGAGCTACAATGGTTCAAAAGATCGAAAGAATAATACACAGGGACATTGAAAGGCAAAGAAGGCACGAAATGTCTAGCCTCTATACTTCACTTAGAGCTCTTCTCCCTTATGAGTTCATCAAGGGAAAGCGTTCGATATCAGATCATGTGAATGAGACAGTGAACTACGTCAAGCACTTGCAGTAG 198 0.4141 MAMMRATMVQKIERIIHRDIERQRRHEMSSLYTSLRALLPYEFIKGKRSISDHVNETVNYVKHLQ* 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00878 65 Pfam Helix-loop-helix DNA-binding domain 14 65 IPR011598 GO:0046983
Pte7g00878 65 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 14 65 IPR036638 GO:0046983
Pte7g00878 65 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 12 64 IPR011598 GO:0046983
Pte7g00878 65 Gene3D - 5 65 IPR036638 GO:0046983
Pte7g00878 65 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 14 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00878 Pte-Chr7 33247379 33247758 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00878 12 65 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 68.519 6.38e-23 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte7g00878 HLH 4.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00878 - - csv:101221467 90.5077