Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00874 ATGAAGGGATACTGTAATTGCGAGCTTTGTGGGAAGAAGGCAAGGACGTACTGTGAATCAGACAAGGCAAAGTTATGTTGGGACTGTGACCAGAAAGTTCATGGTGCAAACTTTCTGTTTGCTAAGCACTCGAGGAGTCTTCTATGTCATGCCTGTCAATTTCCAACTCCATGGAAAGCTAGTGGGTCTAAGCTCTTACCCACTGTTTCATTCTGTGAGGATTCTGTAGGTATTCAAAGGAAATCATGCGATCTTGATGACGAACTTGATGACCAGTACCAGCTTGACCATGCCCCTAGCGAAGATGATGATAACGATGACTGGGAGTACAGCTCTGCCAGTCAACCCGGAGGCTCAAGGAGAAGTAGTGGGTCTCAAGTTATTTTCAGAATAAATTTCAAACCTGCACCTCAAAACGGAGAGGCCTGGACGAAGAGAAGGGACTCGGAAAAATTAGTCAGATCTTGCAGAGCCGTAACTTTGGGTGGAAGCAGCTGA 498 0.4598 MKGYCNCELCGKKARTYCESDKAKLCWDCDQKVHGANFLFAKHSRSLLCHACQFPTPWKASGSKLLPTVSFCEDSVGIQRKSCDLDDELDDQYQLDHAPSEDDDNDDWEYSSASQPGGSRRSSGSQVIFRINFKPAPQNGEAWTKRRDSEKLVRSCRAVTLGGSS* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00874 165 SMART bboxneu5 2 48 IPR000315 GO:0008270
Pte7g00874 165 ProSiteProfiles Zinc finger B-box type profile. 7 48 IPR000315 GO:0008270
Pte7g00874 165 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 6 79 - -
Pte7g00874 165 MobiDBLite consensus disorder prediction 94 125 - -
Pte7g00874 165 MobiDBLite consensus disorder prediction 110 125 - -
Pte7g00874 165 Pfam B-box zinc finger 6 45 IPR000315 GO:0008270
Pte7g00874 165 CDD Bbox1_BBX-like 7 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00874 Pte-Chr7 33083806 33084601 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00874 7 73 C2C2-CO-like Transcription Factor Family AT5G54470 74.627 5.47e-30 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte7g00874 zf-B_box 5.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00874 - - qsa:O6P43_029028 140.584