Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00872 ATGCATTCAAAGCAATCTGTCGATGTAGATGGGTCTACATCTAGGCCTCTGCGGACAAGTGGTAGGATCAGGAGAAGGCCACAGGTATTTGCACGCTCATATTACTATTATGGTTCCAAAATGATTCGCAAAAGACAAAGCAATACCAAGTCAAGACAAGCTGCAGTGGAGATTGCAAAGAAGTTTACAGAGAACCAACCAGTGCGAAATTCAAAATCTGATCCTTTGGCTTCAAATCTTCGGCGTTCAACTAGAAAGAGAAAAGCTCCTTCAAATCTTGGAGAATATGTGGACAGTTCTGGAGCTGAGGATATGGATTTGATGAGACCTACCAAATATCGGCCTATGAGAAGAAAGATTGAGAATAATGTTAGTCAGTATGAATTACTATCTCCAAAGAACAGAAAGGCTGTGGAGAATAAATCAAACCCGCGACGTGAAGGTCTCCGTCCGCGTCACTCAAAGACTGTTATAAGAGAAGAATTGCATTTTGAATCAGATGAAGATCAAGAAACTTCAGAAGAGAAAATTGGACAAGATGAAACTGACAATGGAAATGATATTGATGATGGTCATTTAGAGGGTGATGTTGAGGAAGAAGAGGAGGCTGAAGGTGATGAAGAAGGAGATGAAGATGGCGACGATGAAGAGGAGCATGATGGGAAAAGGCGCTATGATCTTCGAAACCGTTCTGATGTACGCAGGTTTTCTGTGGGCGAGGGTCAGCTACCACCTAGATCTCCTCGACGAGTATTACATCAAGGTATGGGAAACAAAGTTGGTAGGGATATTAGAAAGAGTGGATCACGAGTTCATAAACGTCAACGAATTGCAAGAACTGAAGATTCTGATGACTCCCTTCTTGTTGATGAACTAGACCAAGGCAATTCTATTCCCTGGGGACGAGGTGGGAGTAGATCTGGACCACCTTGGTTATTTGGAGGACTAGATATGCATGGGGCTACAGCTTGGGGTTTAAATGTTGCTGCATCTGGTTGGGGTCATCAAGGTGAAGCATTTGGGACATTGACTTCTGGGGTTCAAACTGCTGGACCAAGTTCTAAGGGAGGGGCTGATATACAACCAGTGCAGGTTGATGTGAGCGTCAGTTTTGATGATATTGGTGGGCTTTCTGAATATATTAATGCTTTAAAGGAAATGGTTTTCTTTCCTTTGCTATATCCAGATTTTTTTGCCAGTTATAATATCACCCCACCCAGAGGAGTGTTGTTATGTGGTCCACCTGGTACAGGTAAAACATTAATAGCTAGAGCTTTGGCCTGTGCTGCATCAAAAGCTGGCCAGAAGGTGAGTTTTTACATGCGTAAGGGGGCAGATGTCCTGAGTAAGTGGGTTGGTGAAGCTGAAAGACAGTTGAAACTACTCTTTGAGGAAGCCCAAAGGAATCAACCATCAATAATTTTCTTTGATGAAATTGATGGACTTGCTCCTGTGAGATCTAGCAAACAAGAGCAAATTCACAACTCCATTGTGTCCACTTTGCTTGCTCTGATGGATGGTCTTGATTCTCGTGGACAAGTTGTTTTGATCGGTGCTACAAACAGGATTGATGCTATAGATGGTGCTTTGCGCCGACCTGGTCGATTTGATCGCGAGTTCAACTTTCCATTGCCTGGTTGTGAGGCTCGTGCTGAAATATTAGACATCCATACTCGCAAGTGGAAGAATCCTCCTCCAAAGGAACTGAAAGCTGAACTTGCAGCTAGTTGTGTCGGTTACTGTGGTGCTGATTTGAAAGCTCTCTGCACTGAAGCTGCTATCCGAGCTTTTCGTGAAAAATACCCTCAGGTGTACTTAAGTGATGACAAATTTCTCATAGATGTCGATTCAGTTAAGGTTGATAAGTACCATTTCATTGAAGCCATGTCAACAATCACTCCCGCTGCTCACAGGGGTGCAATTGTGCATTCCAGGCCATTGTCTCCTGTAGTTGCTCCCTGTTTATGGAGACATCTTCAAGCAGCTATGAATCACATATCTGACATTTTTCCACCAGTTGCTGTTTCATCTGAATTGACCAAGCTTTCTATGCTTTCCTATGGTTCTGCAATTCCTCTAGTGTATCGGCCAAGGCTTCTCCTGTGTGGTGGTGAAGGTACTGGGATGGATCACCTTGGGCCTGCTATTTTACATGAACTGGAGAAGTTTCCTGTCCATTCATTAGGACTTCCATCTCTTCTTTCAGATCCTAGTGCAAAGACACCTGAAGAGGCACTAGTACACATCTTTAGTGAAGCACGGAGAACAACACCATCAATTTTGTATCTACCACAGTTTGATCTTTGGTGGGAAACTGCACATGAGCAACTGAGGGCTGTTATGCTGACATTGCTTGAAGAATTGCCATCTAATTTACCTATATTGTTACTTGGAACATCCTCTGTTCTTCTAGCTGAAGTTGATGAAGCGCCTTCAATTTTCCCTCGATGCTCAGTATATCAAGTGGGGATCCCATCCATCGATGACAGATCCTTGTTTTTCAGTCGATTGATTGAAGCTTCTATGTCAGTCTTGTTGGAGGGAATGACCAAAAAGTCCCAAAATTCAGCATCAATTACTGAACTTCTCAAGGCACCAAAAGTAGCTAGTGGTCCAAAGGAATCTGAGTTGAAAGCAAAGGTTGAAGCTGAGCAGCATGCGTTGCGCAGATTGAGAATGTGCTTTAGAGATGTCTGCAACAGAATCCTATATGACAAGCGATTTAATGCTTTCCATTATCCAGTCACGGATGAAGATGCTCCTAACTATGGGACAATTATTCAGAACCCCATGGATATCGCAACCATACTGCAACATGTTGATAATGGACAATATATTACATGTTCAGCATTCCTCCAAGATATTGATCTTATTGTCTCCAATGCAAAGGTGTATAATGGTGAAGACTATAATGGTTCTAGGATCGTCAGCAGAGCTTGTGAGCTGCGAGATGCGGTTCATGGGATGCTTTCTCAAATGGACCCTGCACTTGTTGCATATTGTGATAAAATTGCTGCCCAAGGGGGTCCCGTTCAGGTGCCTGATGAGTTAAGGAGTTCTGTTTTTGCACCTACTCCTGTTGTACAACTAGGGACGTCTACGAGAATGAGTGCTCGATTGCGTAATGTGCAACCAGAAATTAATCTTGATCAGTGTTATAAGCGGACAAGGAAGAGTTTGGATGCTGGACATGGAGTGACAGATGACAAGTCCCAACAGGATCCAAGCGAGAACAAATTATCACCGGAGCTTGGGGTTAATGAAGGAATTGCAGAGGAACCAGAATCTAGTTCCGTTGATGGAAATCAACGTCAAGTTTGTGCTGAAGCTGTGACCCATGCCAACGAGAACAGCACAGAGAATTTATTAGACGATGAATTTTCAAATGACGTGGAGGCTATCAAGCAGCTTTTTGTGAAGCGAACTGAAAACTATGTCATTCCGCAGCTTGAAAGGCTTTACACCAGAGTCATGAAAGGAGTTTTTGAGACAAAGGAGAAGGGTAGTGAAGACAATCCAAAGACTTCAATTTTGAGATATTTATTGAAATTCGCAGAGGATGATGCGAACTTCTGA 3576 0.4309 MHSKQSVDVDGSTSRPLRTSGRIRRRPQVFARSYYYYGSKMIRKRQSNTKSRQAAVEIAKKFTENQPVRNSKSDPLASNLRRSTRKRKAPSNLGEYVDSSGAEDMDLMRPTKYRPMRRKIENNVSQYELLSPKNRKAVENKSNPRREGLRPRHSKTVIREELHFESDEDQETSEEKIGQDETDNGNDIDDGHLEGDVEEEEEAEGDEEGDEDGDDEEEHDGKRRYDLRNRSDVRRFSVGEGQLPPRSPRRVLHQGMGNKVGRDIRKSGSRVHKRQRIARTEDSDDSLLVDELDQGNSIPWGRGGSRSGPPWLFGGLDMHGATAWGLNVAASGWGHQGEAFGTLTSGVQTAGPSSKGGADIQPVQVDVSVSFDDIGGLSEYINALKEMVFFPLLYPDFFASYNITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKNPPPKELKAELAASCVGYCGADLKALCTEAAIRAFREKYPQVYLSDDKFLIDVDSVKVDKYHFIEAMSTITPAAHRGAIVHSRPLSPVVAPCLWRHLQAAMNHISDIFPPVAVSSELTKLSMLSYGSAIPLVYRPRLLLCGGEGTGMDHLGPAILHELEKFPVHSLGLPSLLSDPSAKTPEEALVHIFSEARRTTPSILYLPQFDLWWETAHEQLRAVMLTLLEELPSNLPILLLGTSSVLLAEVDEAPSIFPRCSVYQVGIPSIDDRSLFFSRLIEASMSVLLEGMTKKSQNSASITELLKAPKVASGPKESELKAKVEAEQHALRRLRMCFRDVCNRILYDKRFNAFHYPVTDEDAPNYGTIIQNPMDIATILQHVDNGQYITCSAFLQDIDLIVSNAKVYNGEDYNGSRIVSRACELRDAVHGMLSQMDPALVAYCDKIAAQGGPVQVPDELRSSVFAPTPVVQLGTSTRMSARLRNVQPEINLDQCYKRTRKSLDAGHGVTDDKSQQDPSENKLSPELGVNEGIAEEPESSSVDGNQRQVCAEAVTHANENSTENLLDDEFSNDVEAIKQLFVKRTENYVIPQLERLYTRVMKGVFETKEKGSEDNPKTSILRYLLKFAEDDANF* 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00872 1191 Gene3D - 678 837 IPR027417 -
Pte7g00872 1191 Pfam ATPase family associated with various cellular activities (AAA) 409 544 IPR003959 GO:0005524|GO:0016887
Pte7g00872 1191 MobiDBLite consensus disorder prediction 1061 1083 - -
Pte7g00872 1191 MobiDBLite consensus disorder prediction 177 191 - -
Pte7g00872 1191 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 693 841 IPR027417 -
Pte7g00872 1191 MobiDBLite consensus disorder prediction 259 279 - -
Pte7g00872 1191 SMART bromo_6 888 995 IPR001487 GO:0005515
Pte7g00872 1191 PRINTS Bromodomain signature 920 936 IPR001487 GO:0005515
Pte7g00872 1191 PRINTS Bromodomain signature 936 954 IPR001487 GO:0005515
Pte7g00872 1191 PRINTS Bromodomain signature 954 973 IPR001487 GO:0005515
Pte7g00872 1191 FunFam ATPase family AAA domain-containing protein 2B 545 630 - -
Pte7g00872 1191 Gene3D - 880 1008 IPR036427 GO:0005515
Pte7g00872 1191 PANTHER AAA DOMAIN-CONTAINING 57 1072 IPR045199 -
Pte7g00872 1191 Pfam AAA+ lid domain 571 607 IPR041569 -
Pte7g00872 1191 MobiDBLite consensus disorder prediction 1 18 - -
Pte7g00872 1191 ProSiteProfiles Bromodomain profile. 911 973 IPR001487 GO:0005515
Pte7g00872 1191 MobiDBLite consensus disorder prediction 64 78 - -
Pte7g00872 1191 MobiDBLite consensus disorder prediction 192 216 - -
Pte7g00872 1191 SUPERFAMILY Bromodomain 876 1000 IPR036427 GO:0005515
Pte7g00872 1191 MobiDBLite consensus disorder prediction 105 121 - -
Pte7g00872 1191 MobiDBLite consensus disorder prediction 60 228 - -
Pte7g00872 1191 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 369 634 IPR027417 -
Pte7g00872 1191 CDD RecA-like_Yta7-like 373 542 - -
Pte7g00872 1191 MobiDBLite consensus disorder prediction 134 170 - -
Pte7g00872 1191 Pfam Bromodomain 902 969 IPR001487 GO:0005515
Pte7g00872 1191 MobiDBLite consensus disorder prediction 1061 1076 - -
Pte7g00872 1191 FunFam ATPase family, AAA domain-containing 2 367 550 - -
Pte7g00872 1191 ProSitePatterns AAA-protein family signature. 514 532 IPR003960 GO:0005524|GO:0016887
Pte7g00872 1191 CDD Bromo_AAA 888 998 - -
Pte7g00872 1191 Gene3D - 545 630 - -
Pte7g00872 1191 SMART AAA_5 405 546 IPR003593 GO:0016887
Pte7g00872 1191 Gene3D - 368 637 IPR027417 -
Pte7g00872 1191 FunFam ATPase family AAA domain-containing protein 880 1008 - -
Pte7g00872 1191 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00872 Pte-Chr7 32977495 32984590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00872 355 603 Calmodulin-binding Proteins AT3G56690 36.364 8.39e-40 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00872 K22531 - qsa:O6P43_000081 1752.26