Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00860 ATGGCTCATTGGCCAGCAAAGTCAAAATGGAAGAACTTTCATTACTTGAGAAAGGTCGCAGGGGACCGCACAATTCCTGTTGAGGTGGGAAAGAATTATTTGTGCCCAGAATGGAAGCAAGAGCTAGTTAGCTTTTCAGATTTTCTTCAGCGAATGCAATGTGCTGACAATTCTTCTTTGGGTCCCACATATCTTGCTCAGCATCCATTATTTGATCAGATAAATGAGCTACGAAATGACATATGTATTCCGGACTATTGCTTTGCTGGTGGAGATGAGCTAACATCTCTTAATGCTTGGTTCGGTCCTGCTGGAACAGTAACTCCATTGCACCATGATCCGCACCATAATATACTTGCACAGGTTGTTGGTAAGAAGTACATAAGGCTTTACCCCGCATCGTTGTCTGAGGAGCTGTATCCATACTCTGAAACCATGCTTTGCAATTCTAGTCAGGTTGATCTGGATAACGTAGATGAAAGCATGTTCCCTAAGTTCTGCAATTTAGACTTCGTGGACTGCATTCTAGAAGAAGGCGAAATGCTCTATATTCCACCAAAGTGGTGGCACTATGTACGCTCGTTAACTACCAGTCTCTCTGTTAGCTTCTGGTGGGGTGAGGGCGACAGTTCAAATTCCTCCTGA 645 0.4388 MAHWPAKSKWKNFHYLRKVAGDRTIPVEVGKNYLCPEWKQELVSFSDFLQRMQCADNSSLGPTYLAQHPLFDQINELRNDICIPDYCFAGGDELTSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNVDESMFPKFCNLDFVDCILEEGEMLYIPPKWWHYVRSLTTSLSVSFWWGEGDSSNSS* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00860 214 SMART cupin_9 57 213 IPR003347 -
Pte7g00860 214 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 1 209 - -
Pte7g00860 214 Gene3D Cupin 1 205 - -
Pte7g00860 214 Pfam Cupin-like domain 1 207 IPR041667 -
Pte7g00860 214 SUPERFAMILY Clavaminate synthase-like 2 205 - -
Pte7g00860 214 FunFam lysine-specific demethylase JMJ30 1 205 - -
Pte7g00860 214 ProSiteProfiles JmjC domain profile. 57 214 IPR003347 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pte7g00860 Cupin_8 1.4e-43 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00860 K24444 - zju:107412622 379.793