Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00844 ATGAGTAGCAGAAGCAGCAAGAGAAACTTGGGATTCGTTCCTTGCGCAACAGGCAACTCAATTGATGATTGCTGGAGGTGTGATCCCTACTGGAAAAACAGCAGGAAGCGACTAGCTGATTGTGGTGTTGGGTTTGGTAAGAACGCCATTGGAGGCAAGCATGGTAACATATACGTGGTCACGGACATGAGTGATGACCCAGTGACTCCCAGGCCTGGGACTCTCAGATTTGGGGTCATCCAAGAAATTCCACTTTGGATCATATTCGACAAAGACATGAACATCAAACTGAAAGAAGAACTCATGGTGAATTCATTTAAAACCATAGATGGTCGTGGAGCAAATGTACACATTGCAGGTGGACCTTGCATTACAGTTCAACATGTGACCAACGTCATCATTCATGGTCTACACATCCATGACTGTAAACCAGGAGGAAATGCCAATGTCAGAGACTCACCAAGACACTTTGGTTGGAGAACTATCAGTGAGGTAACTTTGAAAGTTTAG 510 0.4471 MSSRSSKRNLGFVPCATGNSIDDCWRCDPYWKNSRKRLADCGVGFGKNAIGGKHGNIYVVTDMSDDPVTPRPGTLRFGVIQEIPLWIIFDKDMNIKLKEELMVNSFKTIDGRGANVHIAGGPCITVQHVTNVIIHGLHIHDCKPGGNANVRDSPRHFGWRTISEVTLKV* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00844 169 Gene3D - 18 164 IPR012334 -
Pte7g00844 169 PANTHER PECTATE LYASE 18-RELATED 7 164 IPR045032 GO:0030570
Pte7g00844 169 SUPERFAMILY Pectin lyase-like 19 154 IPR011050 -
Pte7g00844 169 PRINTS Pollen allergen Amb family signature 100 116 IPR018082 -
Pte7g00844 169 PRINTS Pollen allergen Amb family signature 64 89 IPR018082 -
Pte7g00844 169 PRINTS Pollen allergen Amb family signature 41 58 IPR018082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00844 Pte-Chr7 32589785 32590294 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00844 6 164 Polysaccharide Lyase AT5G63180 72.500 1.29e-85 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00844 K01728 - sly:101252082 277.715