Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00840 ATGGCGATCTGTTCAAGCAAGGGCACAATCACAGTGACAGCAACCAATTTCTGCCCTCCAAATTATTCAAAACCTGATGGCAACTGGTGCAACCCTCCCCAGAAACACTTTGACTTGTCATTGCCAATGTTCACCAAAATTGCACAGTACAAAGCAGGCATCGTCCCTGTGAGGTACCGTCGTGTACATTGCCATAAAAATGGAGGGCTCAAGTTTGAGATCAAGGGGAACAACTACTGGACTCTTGTGTTGCTTTACAACGTTGGAGGTGTTGGCGACATATCAAATGTTAAGATGAAAGGATCCAATACTGGTTGGATTCAGATGTCACGTAACTGGGGACAGAATTGGCAGACTGGAACTGTTGTCTCAGGGCAGCAGTTGTCCTTCCAAGTCACCACCAGTGATGGAAAAACTTTGCAGTTTAACAATGTTGCACAGGCAGATTGGCGTTTTGGTCAGACCTACGATGGCAAGATAAACTTTTAG 489 0.454 MAICSSKGTITVTATNFCPPNYSKPDGNWCNPPQKHFDLSLPMFTKIAQYKAGIVPVRYRRVHCHKNGGLKFEIKGNNYWTLVLLYNVGGVGDISNVKMKGSNTGWIQMSRNWGQNWQTGTVVSGQQLSFQVTTSDGKTLQFNNVAQADWRFGQTYDGKINF* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00840 162 Gene3D - 66 162 IPR036749 -
Pte7g00840 162 PANTHER EXPANSIN-A15 4 159 IPR002963 GO:0009664
Pte7g00840 162 SUPERFAMILY Barwin-like endoglucanases 4 87 IPR036908 -
Pte7g00840 162 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 1 69 IPR007112 -
Pte7g00840 162 Gene3D - 2 65 IPR036908 -
Pte7g00840 162 PRINTS Expansin/Lol pI family signature 52 68 IPR007118 GO:0005576
Pte7g00840 162 PRINTS Expansin/Lol pI family signature 106 120 IPR007118 GO:0005576
Pte7g00840 162 PRINTS Expansin/Lol pI family signature 144 158 IPR007118 GO:0005576
Pte7g00840 162 SMART dpbb_1 1 59 IPR007112 -
Pte7g00840 162 Pfam Lytic transglycolase 4 59 IPR009009 -
Pte7g00840 162 PRINTS Expansin signature 115 136 IPR002963 GO:0009664
Pte7g00840 162 PRINTS Expansin signature 80 101 IPR002963 GO:0009664
Pte7g00840 162 PRINTS Expansin signature 68 80 IPR002963 GO:0009664
Pte7g00840 162 PRINTS Expansin signature 10 20 IPR002963 GO:0009664
Pte7g00840 162 PRINTS Expansin signature 27 44 IPR002963 GO:0009664
Pte7g00840 162 PRINTS Expansin signature 144 160 IPR002963 GO:0009664
Pte7g00840 162 PRINTS Expansin signature 44 57 IPR002963 GO:0009664
Pte7g00840 162 Pfam Expansin C-terminal domain 71 146 IPR007117 -
Pte7g00840 162 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 79 158 IPR007117 -
Pte7g00840 162 SUPERFAMILY PHL pollen allergen 66 158 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00840 Pte-Chr7 32573660 32574258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00840 8 163 Expansin Gene Family AT5G39300 67.949 6.66e-78 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00840 - - qsa:O6P43_002576 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte7g00840 7 32573660 32574258 Pte7g00840 7 32573660 32574258 RCT