LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte7g00830	ATGATGAATTCTATGCAGGTCTTGGTTCACAAGAGAATGACCTTTGCAAGTGTTGTGCTTCTTCTGGTTATTACAGTAACACATGGAGCAAGTCATGATGAGACAGAAGCAGCAGAAGCAGATAGGATACTGAAACTCCCAGGACAGCCACTCGTGCCATTTCAACAGTTCTCTGGCTATGTCACTGTCAACCATGTTGCTGGTAGAGCCCTCTTCTACTGGCTCACGGAAGCTGCTCAAACTCCATGGAGCAAACCTCTGGTAATTTGGCTCAATGGAGGCCCCGGATGCTCATCTGTTGCATATGGAGCATCTGAAGAGATAGGCCCATTCAGAATAAACAGAACAGCCTCTGGATTATACCTTAACAAATTCTCATGGAACACAGTGGCCAACCTCTTGTTCTTGGAAACCCCTGCTGGGGTTGGCTTCTCCTACACCAACAGATCATCTGACCTTCTTGATACTGGTGACCATCGCACTGCTAAGGACTCTCTGGAATTCATAATCAGATGGTTTGATCGTTTCCCTCGTTATAAGAATAGAGAAGTGTATCTCACAGGCGAGAGCTATGCAGGACATTATGTGGGAAATGCAGTCACAGATAACTACTATGATAACCTCGGGACAGTAAACTACTGGTGGAGTCATGCTATGATCTCTGATAAGACGTACCATCAGCTAATCGACACTTGCGATTTTCGTAGGCAAAAGGAATCAGATGAATGTGAGTCTCTCTACAGTTATGCCATGGATCAAGAATTTGGTAATATTGATCAGTACAACATCTATGCACCACCTTGCAATATGAAATCAGATGGTGGCTCAGCCACCCTCCACACCATGCGATTACCCCACCTACCTCGACCGATTTTCAGGAAGCTGTCAGGATATGATCCATGTACTGAAAAACATGCTGAGATTTACTACAATAGACCAGATGTTCAGAAAGCCCTCCATGCCAATACAACTGGTATCCGTTACAAGTGGACTGCTTGCAGTGAAGTTCTGAACCGCAATTGGAATGACACAGACGTATCGGTTCTTCCAATTTACAGAGACATGATAGCTGCTGGATTAAGAATCTGGGTTTTCAGCGGAGATGTTGACTCAGTGGTACCAGTAACAGCAACTAGGTATTCTCTTGCACAATTGAAATTAGCAACCAAATTTTCATGGTACCCTTGGTATGTGAAGGATCAGGTTGGAGGGTGGACAGAGGTTTATGAAGGTTTGACATTTGCAACAGTAAGGGGAGCTGGTCATGAAGTGCCCTTGTTCAAGCCAAGAGCAGCCCTTCAGCTATTCAAATCATTTATCGGTGGAAAGCCTCTTCCAAAGTCAATAAAAGTGCTTCCATAA	1362	0.4449	MMNSMQVLVHKRMTFASVVLLLVITVTHGASHDETEAAEADRILKLPGQPLVPFQQFSGYVTVNHVAGRALFYWLTEAAQTPWSKPLVIWLNGGPGCSSVAYGASEEIGPFRINRTASGLYLNKFSWNTVANLLFLETPAGVGFSYTNRSSDLLDTGDHRTAKDSLEFIIRWFDRFPRYKNREVYLTGESYAGHYVGNAVTDNYYDNLGTVNYWWSHAMISDKTYHQLIDTCDFRRQKESDECESLYSYAMDQEFGNIDQYNIYAPPCNMKSDGGSATLHTMRLPHLPRPIFRKLSGYDPCTEKHAEIYYNRPDVQKALHANTTGIRYKWTACSEVLNRNWNDTDVSVLPIYRDMIAAGLRIWVFSGDVDSVVPVTATRYSLAQLKLATKFSWYPWYVKDQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKSFIGGKPLPKSIKVLP*	454

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte7g00830	453	Gene3D	alpha/beta hydrolase	37	270	IPR029058	-
	Pte7g00830	453	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	44	429	IPR001563	GO:0004185\|GO:0006508
	Pte7g00830	453	ProSitePatterns	Serine carboxypeptidases, serine active site.	186	193	IPR018202	GO:0004185
	Pte7g00830	453	PRINTS	Carboxypeptidase C serine protease (S10) family signature	412	425	IPR001563	GO:0004185\|GO:0006508
	Pte7g00830	453	PRINTS	Carboxypeptidase C serine protease (S10) family signature	172	197	IPR001563	GO:0004185\|GO:0006508
	Pte7g00830	453	PRINTS	Carboxypeptidase C serine protease (S10) family signature	123	135	IPR001563	GO:0004185\|GO:0006508
	Pte7g00830	453	PRINTS	Carboxypeptidase C serine protease (S10) family signature	136	146	IPR001563	GO:0004185\|GO:0006508
	Pte7g00830	453	SUPERFAMILY	alpha/beta-Hydrolases	46	446	IPR029058	-
	Pte7g00830	453	FunFam	Carboxypeptidase	348	442	-	-
	Pte7g00830	453	Gene3D	-	301	338	-	-
	Pte7g00830	453	ProSitePatterns	Serine carboxypeptidases, histidine active site.	412	429	IPR033124	GO:0004185
	Pte7g00830	453	Gene3D	-	348	442	-	-
	Pte7g00830	453	Pfam	Serine carboxypeptidase	48	196	IPR001563	GO:0004185\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte7g00830	Pte-Chr7	32371768	32375881	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte7g00830	306	445	Calmodulin-binding Proteins	AT2G22960	31.206	5.72e-16	74.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte7g00830	K16297		-	qsa:O6P43_004403	767.303