Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00825 ATGGGTTGTGTTTCTTTGTGTTCTTCAGTGATCAAATGGGATTCTTTTCACAGTCCCTTTTTACGCGCAATCGTCATAGTTAATCTTTTGTTCCTGTGGTGTAATTTGTCTTATGGCGAAGTGGGTTTGACTGATTCTGATAAATCGACGTTGCTTCAGTTCAAGAACTCAGTCTCGGACCCAGCGGGTTTACTCTCAAGTTGGAATTCTGCTGATCCTAATTATTGTGCCTGGTCCGGTGTTTTGTGTAATTCAGTTTCTCGGGTTGTTTCGCTCAACATTACTGGAAATGGAGGAGGAGGTAAGTCGAATGCTTTCTCGTGTTATGATTCTGCGCAATTCCCACTGTACTGGTTTGGAATTAGAAGAAAATGTGAGGGCGTCAGCGGTAATCTGAAAGGGAGGTTGCCTGTTGCAATAGGTAAACTTACTGAGCTTAGAATTTTATCGCTTCCATTTAATAGATTTGATGGGGAAGTTCCAAGTGAAATATGGAATATGGACAAGCTGGAAGTTCTTGATCTAGAAGGTAATTTGATAGGGGCGACACTGCCTCTTCAGTTTTGTAGGTTGAAGAATTTACGAGTTCTTAATCTCGGGTTTAATAGACTTTCAGGGGAGATACCGAGCTCACTTGCAAGTTTGAATAACTTGCAAATTTTGAATTTGGCTGGGAACAGTTTAAATGGCTCTGTTCCCAAATTTGTCAGTAAACTAAGGGAGGTGCATTTGTTGTTTAATTTTCTCAGTGGGGTGATTCCAAGTGAGATTGGGGAGAACTGTGGTATGCTCGAGCATCTTGACTTGTCAGGTAATTTCCTGGCAGGTGGAATTCCGAGCAGTTTGGGGAATTGTCGTCAGTTGAGATCACTTCTATTGTATGAAAATAAGTTGAAGGAGGCCATTCCTGCTGAGCTTGGTAATCTGCAGAACCTACAAGTTCTCGATGTTTCTAGGAATAGTCTCAGTGGTGCCATACCTAAGGAGCTTGGAAATTGTTCTGAGTTATCTGTACTTGCGCTGTCAAATTTAGTCAATGCGTTTCCAGTGGCCAAGAATGACAGAAGGGACTCCTCTTGGGAGCAGTTGGATTCTGTTGATGATGAAAATAATCACTTCGATGGTGGAATTCCGGTAGAAATTTCTACACTTCCAAAACTCAGGATATTATGGGCACCACGGGCTACTCTTGAGCACAGTTTCCCGAGCAGTTGGGGTGCTTGTGAAAGCCTAGAGATGATCAATTTGTCTCAGAATCACTTCACCGGGGAATTCCCTATTGAGCTCAAGCAGTGTGAGAAGCTGCATTTTCTTGATATAAGCTCAAACAACCTAACTGGGGAGCTCCATGAAGAATTCCCTGTTCCCTGTCTAACTGTGTTTGATGTCAGTGGCAACTCCTTTTCTGGTTCTATTCCGCATTTCGCTGATAACTTTTGTCCTCCTCTTCCTTCTTGGAGCAGCGATCTCTTTGAAAATGATAACCCTTATCCTTTATACAAATCATTCTTTGTATCCTCGTTTCAGCTTGGAACCATCTTGCATTTGCTTGGTAATGCTACTGGTCGTTCAGTATTCCACAACTTTGGTCACAACAACTTTACAGGCATCATCCAGTCAATGCCGATTGCAGAGGACAGAAAAGGGGAGCAGACTGTGTATACATTTCTTGTTGGAGAAAACAAGCTAACAGGATCGTTTCCGGGTACTTTATTTGATAAGTGTGATGGATTAGATGGAGTGATTGTTGATGTCAGTAATAACAGGTTATTTGGTGAGATTCCAGTTGGATTTGACTTGATCTGCAGATCTCTAAAGTACTTGGATTTATCTGGGAATCAACTTTATGGATCAATCCCTTCTGATTTGTGGGAGTTGGTATCTCTTGTTGGCTTGAATTTCAGCAGGAATCAGTTGCAAGGTCAGATTCCATCCAGCCTTGGTCAGCTAAAGAACCTAAAGTTTTTCTCTTTGGCTGGTAATAACTTGACTGGTGTTATTCCCACCGAGTTAGGTCAATTATACAATTTACAAGTTCTTGATCTTTCTTCAAACTCTCTTGTTGGTAAGATTCCCAAGGACCTTATAAACCTGAAAAGCCTGAGAGAACTTCTGCTCAATAACAACAATCTCAGTGAGGAAATTCCTGCAGGTTTGGTAAATGTGACCAAACTTTCATCATTCAATGTGTCTTCTAATGACTTGTCTGGACCAGTTCCTTTGAATGGTAACACCGTTAACTGCGGTAGTGCTATTGGGAACCCAGACGTTCAGCCTTGCCATGTTTTTTCTCTGACAGTGTCATCTTCGGATCGGCAAGTAAATACTGGAGCATTGAACTCCCCGGGTTCAACACCCCCAGAGGCTAATAGCAACCAACATGGGAATGGTTTTAATACTATCGAGATAGCATCTATAACATCTGCATCGGCCATAGTTGCTGTTCTTCTGGCCTTGATTGTCCTATTCTTCTACACAAGGAAGTGGAACACTAGAGCGCGGGTTGGCGGTTCTACCAGAAAGGAAGTAACTGTTTTTACCGATATCGGAGTTCCACTGAACTATGAGAGCATTGTGCATGCAACTGGAAATTTCAATACTAGTAACTGCATAGGAAGTGGAGGATTTGGAGCAACCTATAAAGCTGAGATATCACCAGGAGTTTTAGTGGCAATAAAGCGGCTTGCGGTTGGACGATTCCAAGGCGTTCAACAATTCCATGCAGAAATCAAAACCCTAGGGCGACTTCGTCATCCAAATTTAGTCACTTTAATAGGTTATCATGCTAGTGAGACGGAAATGTTCCTCATTTACAATTACCTACCTGGGAGCAATCTTGAAAAATTCATTCATGAAAGATCAAATAGGCCTGTGGATTGGAAGATTCTTCACAAGATTGCATTAGATGTAGCCCGTGCTCTAGCCTATCTTCATGATCAGTGCGTACCACGAGTCCTGCACCGTGATGTGAAACCCAGTAATATCTTGCTGGATGATGATTACAATGCTTATCTATCTGATTTCGGATTGGCCAGACTCTTGGGAACATCAGAAACACATGCCACCACTGGGGTTGCTGGAACTTTTGGATATGTTGCTCCTGAATATGCAATGACTTGCCGGGTTTCTGACAAAGCTGATGTATACAGTTATGGCGTGGTACTTCTGGAGTTACTGTCAGATAAAGAGGCATTGGATCCTTCATTTTGTTCTTATGAAAATGGTTTCAACATTGTAGCATGGGCATGTATGCTCTTGAAGCAGGGAAAAGCTAAAGAGTTTTTCACACGGGGACTGTGGGATGCAGCTCCTCAGGATCATTTGGTGGAAGTCTTGCACTTGGGTGTTGTCTGCACCGTTGAGTCTCTCTCCACTAGACCTACCATGAGACAGGTTCTCCGACGTCTCAAGCAGCTTCAGCCACAATAA 3429 0.4261 MGCVSLCSSVIKWDSFHSPFLRAIVIVNLLFLWCNLSYGEVGLTDSDKSTLLQFKNSVSDPAGLLSSWNSADPNYCAWSGVLCNSVSRVVSLNITGNGGGGKSNAFSCYDSAQFPLYWFGIRRKCEGVSGNLKGRLPVAIGKLTELRILSLPFNRFDGEVPSEIWNMDKLEVLDLEGNLIGATLPLQFCRLKNLRVLNLGFNRLSGEIPSSLASLNNLQILNLAGNSLNGSVPKFVSKLREVHLLFNFLSGVIPSEIGENCGMLEHLDLSGNFLAGGIPSSLGNCRQLRSLLLYENKLKEAIPAELGNLQNLQVLDVSRNSLSGAIPKELGNCSELSVLALSNLVNAFPVAKNDRRDSSWEQLDSVDDENNHFDGGIPVEISTLPKLRILWAPRATLEHSFPSSWGACESLEMINLSQNHFTGEFPIELKQCEKLHFLDISSNNLTGELHEEFPVPCLTVFDVSGNSFSGSIPHFADNFCPPLPSWSSDLFENDNPYPLYKSFFVSSFQLGTILHLLGNATGRSVFHNFGHNNFTGIIQSMPIAEDRKGEQTVYTFLVGENKLTGSFPGTLFDKCDGLDGVIVDVSNNRLFGEIPVGFDLICRSLKYLDLSGNQLYGSIPSDLWELVSLVGLNFSRNQLQGQIPSSLGQLKNLKFFSLAGNNLTGVIPTELGQLYNLQVLDLSSNSLVGKIPKDLINLKSLRELLLNNNNLSEEIPAGLVNVTKLSSFNVSSNDLSGPVPLNGNTVNCGSAIGNPDVQPCHVFSLTVSSSDRQVNTGALNSPGSTPPEANSNQHGNGFNTIEIASITSASAIVAVLLALIVLFFYTRKWNTRARVGGSTRKEVTVFTDIGVPLNYESIVHATGNFNTSNCIGSGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYLPGSNLEKFIHERSNRPVDWKILHKIALDVARALAYLHDQCVPRVLHRDVKPSNILLDDDYNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKEALDPSFCSYENGFNIVAWACMLLKQGKAKEFFTRGLWDAAPQDHLVEVLHLGVVCTVESLSTRPTMRQVLRRLKQLQPQ* 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00825 1142 Pfam Leucine rich repeat N-terminal domain 45 84 IPR013210 -
Pte7g00825 1142 Pfam Leucine Rich Repeat 311 333 IPR001611 GO:0005515
Pte7g00825 1142 Pfam Leucine Rich Repeat 264 285 IPR001611 GO:0005515
Pte7g00825 1142 Gene3D Transferase(Phosphotransferase) domain 1 942 1141 - -
Pte7g00825 1142 ProSiteProfiles Leucine-rich repeat profile. 676 699 IPR001611 GO:0005515
Pte7g00825 1142 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 361 1138 - -
Pte7g00825 1142 CDD STKc_IRAK 871 1139 - -
Pte7g00825 1142 ProSitePatterns Protein kinases ATP-binding region signature. 871 893 IPR017441 GO:0005524
Pte7g00825 1142 PRINTS Leucine-rich repeat signature 674 687 - -
Pte7g00825 1142 PRINTS Leucine-rich repeat signature 605 618 - -
Pte7g00825 1142 MobiDBLite consensus disorder prediction 773 794 - -
Pte7g00825 1142 ProSitePatterns Serine/Threonine protein kinases active-site signature. 985 997 IPR008271 GO:0004672|GO:0006468
Pte7g00825 1142 SUPERFAMILY L domain-like 358 741 - -
Pte7g00825 1142 SMART serkin_6 865 1139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g00825 1142 Pfam Protein kinase domain 867 1066 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g00825 1142 SUPERFAMILY Protein kinase-like (PK-like) 852 1134 IPR011009 -
Pte7g00825 1142 Gene3D Ribonuclease Inhibitor 551 765 IPR032675 -
Pte7g00825 1142 Gene3D Ribonuclease Inhibitor 44 237 IPR032675 -
Pte7g00825 1142 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 258 349 - -
Pte7g00825 1142 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 522 765 - -
Pte7g00825 1142 Gene3D Phosphorylase Kinase; domain 1 826 940 - -
Pte7g00825 1142 ProSiteProfiles Protein kinase domain profile. 865 1142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g00825 1142 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 829 940 - -
Pte7g00825 1142 Pfam Leucine rich repeat 169 228 IPR001611 GO:0005515
Pte7g00825 1142 Pfam Leucine rich repeat 652 711 IPR001611 GO:0005515
Pte7g00825 1142 SMART LRR_typ_2 167 190 IPR003591 -
Pte7g00825 1142 SMART LRR_typ_2 602 626 IPR003591 -
Pte7g00825 1142 SMART LRR_typ_2 309 333 IPR003591 -
Pte7g00825 1142 SMART LRR_typ_2 191 214 IPR003591 -
Pte7g00825 1142 SMART LRR_typ_2 650 673 IPR003591 -
Pte7g00825 1142 SMART LRR_typ_2 698 722 IPR003591 -
Pte7g00825 1142 SMART LRR_typ_2 215 239 IPR003591 -
Pte7g00825 1142 SMART LRR_typ_2 674 697 IPR003591 -
Pte7g00825 1142 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 941 1142 - -
Pte7g00825 1142 Gene3D Ribonuclease Inhibitor 357 542 IPR032675 -
Pte7g00825 1142 Gene3D Ribonuclease Inhibitor 238 350 IPR032675 -
Pte7g00825 1142 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 358 449 - -
Pte7g00825 1142 SUPERFAMILY L domain-like 46 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00825 Pte-Chr7 32161692 32165402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00825 43 1141 Receptor kinase-like Gene Family AT3G02130 63.579 0.0 1336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Pte7g00825 Pkinase 5.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00825 - - qsa:O6P43_009155 1554.27