Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00808 ATGGTGGCAATGATGACCTGGGGAATTCATGAACAAGGTTGGAGGAAGGGTCCTTGGACCCCTGCAGAGGACAAGTTACTCAGTGAGTATATAAGCAAGCATGGAGAGGGAAGGTGGAGCTCAGTGGCTAGTTGTGCAGGCCTGAATAGAACTGGCAAAAGCTGCAGGTTGAGGTGGGTCAATTATTTAAGGCCTGGCCTCAAGAGAGGTCACTTAACTCCTCAAGAAGAAGGCATCATCATTGAACTGCATGCCCTATGGGGTAACAAGTGGTCAACCATTGCCAGATACTTGCCTGGTAGAACTGACAATGAGATTAAGAATTACTGGAGAACCCATTTCAAGATCAAAGAAAAATCTTCTCAGAAGCAAGGAAAGAGAAGACAGCTGCTAAAGGAGAAAAGAGAGCAGCAGCAGCAACTGTTGTTTCAACAAAAGCAGCAAGCAAGGGAACATGACATGCAAAAGGTCCAAGATATATTACATGATAACCCTGAGAATGCAAAACAGATGGAGGAAACACAAAAGAAACAAGACACGTTCTTTGCTTATCCAACAATGGAGAACCAGTACTGCGTGCCTTATATGCATCATCAAGATCTTTCACCAACATGGTTTGATACTGCAGTAGACGTGGGCTTGTGGGGTGGCTTGTGGAACCTTGATGAGCCATACGGCTGCAGCTATGATCGCATCAACAATAAGTTAGAAACTCCACATAACCAAAGCAATGCCTTGTGGAGGACATTCCCATAA 756 0.4484 MVAMMTWGIHEQGWRKGPWTPAEDKLLSEYISKHGEGRWSSVASCAGLNRTGKSCRLRWVNYLRPGLKRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKIKEKSSQKQGKRRQLLKEKREQQQQLLFQQKQQAREHDMQKVQDILHDNPENAKQMEETQKKQDTFFAYPTMENQYCVPYMHHQDLSPTWFDTAVDVGLWGGLWNLDEPYGCSYDRINNKLETPHNQSNALWRTFP* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00808 251 Coils Coil 127 148 - -
Pte7g00808 251 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 12 180 IPR044676 GO:0003700|GO:0006355|GO:0043565
Pte7g00808 251 Gene3D - 16 68 - -
Pte7g00808 251 CDD SANT 73 114 IPR001005 -
Pte7g00808 251 Gene3D - 72 117 - -
Pte7g00808 251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 118 IPR017930 -
Pte7g00808 251 FunFam Myb transcription factor 16 68 - -
Pte7g00808 251 CDD SANT 18 63 IPR001005 -
Pte7g00808 251 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Pte7g00808 251 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Pte7g00808 251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 67 IPR017930 -
Pte7g00808 251 SMART sant 15 65 IPR001005 -
Pte7g00808 251 SMART sant 68 116 IPR001005 -
Pte7g00808 251 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Pte7g00808 251 Pfam Myb-like DNA-binding domain 70 113 IPR001005 -
Pte7g00808 251 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00808 Pte-Chr7 31592327 31593550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00808 13 223 MYB Transcription Factor Family AT3G30210 57.477 1.05e-75 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte7g00808 Myb_DNA-binding 2.9e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00808 K09422 - cave:132182894 282.722