Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00797 ATGGAAAAGCTGAATTTTGTTAAGAATGGTGTGCTTAGATTACCTCCTGGATTCAGGTTTCATCCAACAGATGAAGAGCTTGTGATTCAGTATTTGAAACGCAAAGTCCTTTCCAGTCCCTTGCCTGCCTCCATCATCCCTGAAGTTGATGTCTGCAAGTCCGATCCTTGGGATTCGCCAGGCGATCTGGAGCAAGAAACGTACTTCTTCAGCACAAGGGAGGCCAAATATCCCAATGGGAATCGATCCAACAGAGCCACAGGTTCTGGTTACTTGAAGGCAACAGGATTGGACAAGCAAATTGTTACCTCAAAGAGTAACCATGTTGTTGGGATGAAGAAGACTTTGGTTTTCTACAGAGGCAAACCACCTCATGGCTGA 381 0.4541 MEKLNFVKNGVLRLPPGFRFHPTDEELVIQYLKRKVLSSPLPASIIPEVDVCKSDPWDSPGDLEQETYFFSTREAKYPNGNRSNRATGSGYLKATGLDKQIVTSKSNHVVGMKKTLVFYRGKPPHG* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00797 126 SUPERFAMILY NAC domain 10 126 IPR036093 GO:0003677|GO:0006355
Pte7g00797 126 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 126 - -
Pte7g00797 126 Pfam No apical meristem (NAM) protein 15 123 IPR003441 GO:0003677|GO:0006355
Pte7g00797 126 ProSiteProfiles NAC domain profile. 14 126 IPR003441 GO:0003677|GO:0006355
Pte7g00797 126 Gene3D NAC domain 23 126 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00797 Pte-Chr7 31427423 31427911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00797 1 126 NAC Transcription Factor Family AT5G13180 80.952 6.48e-77 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte7g00797 NAM 4.6e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00797 - - csav:115712846 243.817