Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00791 ATGTCTGAGACCTCAACCTCACACCTAGCTCACCGTCTCAACCTTGAACACGAATCTCAATCCAACCCAGATGAGCATTATCCAGATTCTCCAACCCTTGATTCCCTCGCTCATCTCTGCCCAGATGAATACCTCTCAAACCCTTTTTCTACAACCTCCTCCTATTCTAACCCACACTCTGCGGCTGCTACGCATGATTCTCCGACCCAATATTCCAACTTCATCTCCAATTGGGATTTAAATTCAGATTCGTATTCGTATTCAGATTCTGATTCTGTTAACTGCTTTCTAACCGATCTCTTTGATAACAGGTCAAGCCAACAGCTTGATGATTTCTCCGATGCCAGTTCGTATATCAACCCGTTCTCTGAGGTGGGTTTCGAGGCGCATGACGCGAGTAGTGGGTTAGGGTTTGGTGGAGTGGGACCCATCCAGCGTAATTCAAGTGTGAATGGTCTTCGGGTTACCGGGTTTGACTCGGATTCGGATTCAGCTTCAGGGGGTGCTGGTGAGGTTGATAGGGAGGTTGAATTCAATGATTGGGGAAATGAAAATGGTGGGTTTGATGTTTCCGATATGGGTTTGTGTTTGGACAACCTGATCTTGGAAAATCAGAGGACAATGCGTGATAATCTTGAGTGGGAGGGACTGGAGGAGAGAGAAGATATAAGTGTGGTGATTGATGAGGTTGAAGATTTATCAGCTACATCTGGGTTTTCATATGGAGACGATGAGGCAGGTGAAGACGCATGGAGATATCTAGAGTGGCAAATTCTGTTGGCAATTAATAATCTAGGACAGGACACAAATGTGGATGATGATGCCGTCGATTCAGCTGCTGATGTCCAAGTATCTGCTATTAATTATGAAGCCATTTTTGAAGTAGACAGTGAAGTTAGTTTCAAGATTAATCCCCCTGCATCCAAAGTTATTGTCGAGAATCTGCCATTGGTAGAGCTGACAATGGAAGATATGCAGAACATTTCTACTTGTGCAATTTGCAAAGATGAGGTACTTGTGGAGGAGAAGTTGACGAGGCTTCCTTGTTCGCATTATTATCATGGAGAGTGTATTATTCCTTGGTTAAGTATCCACAATACATGCCCTCTTTGTCGGTTTGAATTGCCTACAGATGATCCTGATTATGAGCGGAGGAAAATTCAGAGATCAATTCGTAACCTATCTGGATTTACTGGGCAAGCTGGGAACAAAGGCAGGAGTGGAATGTATAACTGCATATGA 1242 0.4396 MSETSTSHLAHRLNLEHESQSNPDEHYPDSPTLDSLAHLCPDEYLSNPFSTTSSYSNPHSAAATHDSPTQYSNFISNWDLNSDSYSYSDSDSVNCFLTDLFDNRSSQQLDDFSDASSYINPFSEVGFEAHDASSGLGFGGVGPIQRNSSVNGLRVTGFDSDSDSASGGAGEVDREVEFNDWGNENGGFDVSDMGLCLDNLILENQRTMRDNLEWEGLEEREDISVVIDEVEDLSATSGFSYGDDEAGEDAWRYLEWQILLAINNLGQDTNVDDDAVDSAADVQVSAINYEAIFEVDSEVSFKINPPASKVIVENLPLVELTMEDMQNISTCAICKDEVLVEEKLTRLPCSHYYHGECIIPWLSIHNTCPLCRFELPTDDPDYERRKIQRSIRNLSGFTGQAGNKGRSGMYNCI* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00791 413 MobiDBLite consensus disorder prediction 1 33 - -
Pte7g00791 413 ProSiteProfiles Zinc finger RING-type profile. 331 372 IPR001841 -
Pte7g00791 413 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 182 376 - -
Pte7g00791 413 MobiDBLite consensus disorder prediction 10 24 - -
Pte7g00791 413 SMART ring_2 331 371 IPR001841 -
Pte7g00791 413 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 294 378 IPR013083 -
Pte7g00791 413 FunFam E3 ubiquitin-protein ligase RNF181 295 378 - -
Pte7g00791 413 Pfam Ring finger domain 330 372 IPR001841 -
Pte7g00791 413 CDD RING-H2_PA-TM-RING 330 372 - -
Pte7g00791 413 SUPERFAMILY RING/U-box 312 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00791 Pte-Chr7 31305616 31308210 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00791 147 386 C3H Transcription Factor Family AT3G02340 36.782 4.57e-40 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00791 - - pcin:129304768 303.523