Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00780 ATGCGAAGCATAAAAACCATGAAGCTCAATAACAATGGGGGTGACATGGATGACCATAGTGCTGGAAAAAAATGGCCTCGTGCTTGTGACACATGCCAGTCTGAAGCCTGCAAAGTGTATTGCAGAGCTGATGATGCCTACCTGTGCAGCACGTGCGATTCTCGAATCCATGCTGCGAATCACTTAGCTTCGAGACATGAGCGAGTGTGGGTCTGTGACGCTTGTGAGTGTGCCCCTGCTGCTTTTCTATGCAAGGCTGATGCTGCATCTCTCTGCTCTACCTGTGATGCAACCACACACTCTGCAAACCCTCTTGCAGGCCGACACCAACGTTTTCCAATCATTCCTATATCTGGCTGCAGCATCCATGAACGCCATCCCACTGAGGTTGATGGGGAAAATGTTGATTTTCTAGCACAAGGAGAGGAGGAGGATGAAAATGAAGATGAAGATGAAGATGAGGCTGCGTCATGGTTACTGTTGAATCCTGTAAAGAATATCAGCAATCAGATCAGTTACTTGTTTGGTGATGATGTTGATAAGTATTTGGACCTCGAGAACTACAATCACGGTGCTAAGGATGAGTTCAGTGAGGATGAACCTTCGCAGTATCATATGCAGCAAAAACAAGAAGGTACTCAAAAAAAGAGTTATGGAGGTGATAGTGTTGTTCCCATTGAAGGTGGAGAATCCAAAGAACATTTACAGCAGCAGCAGCAGCAAGGACACAATTTTCTGACGAGGTTTGGCTTTGATTATCCAAAAGCCGATTACTCTCGCAATGATTCTTTAACACAAAGCGTATCAGTTTCATCTATGGATCTCGGAATTGTACCAGAATCAACAGTAGTTGATGTTTCACTCACCCAATATCCACAGCCAACTAACCAGACCGTTGAGCTCTTCTCTAGCTCTCCCATTCAGATGCCCCAGCAGCTGAGTCAAATGGACAGGGAAGCCAGAGTGCTGCGTTACAGGGAGAAGAAGAAGACAAGGAAGTTTGAGAAAACAATAAGATATGCTTCAAGGAAAGCATATGCAGAAACAAGACCACGTATCAAGGGTCGGTTTGCCAAAAGAGCAGCAGCAGCAAAAGGTGAAGTTGATCAAATGATCTCCACGACATTTATCGCAGAATCTAGATATGGCATTGTCTCCTCTTTCTAA 1167 0.449 MRSIKTMKLNNNGGDMDDHSAGKKWPRACDTCQSEACKVYCRADDAYLCSTCDSRIHAANHLASRHERVWVCDACECAPAAFLCKADAASLCSTCDATTHSANPLAGRHQRFPIIPISGCSIHERHPTEVDGENVDFLAQGEEEDENEDEDEDEAASWLLLNPVKNISNQISYLFGDDVDKYLDLENYNHGAKDEFSEDEPSQYHMQQKQEGTQKKSYGGDSVVPIEGGESKEHLQQQQQQGHNFLTRFGFDYPKADYSRNDSLTQSVSVSSMDLGIVPESTVVDVSLTQYPQPTNQTVELFSSSPIQMPQQLSQMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRAAAAKGEVDQMISTTFIAESRYGIVSSF* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00780 388 ProSiteProfiles Zinc finger B-box type profile. 24 71 IPR000315 GO:0008270
Pte7g00780 388 CDD Bbox1_BBX-like 71 114 - -
Pte7g00780 388 ProSiteProfiles Zinc finger B-box type profile. 67 114 IPR000315 GO:0008270
Pte7g00780 388 SMART bboxneu5 72 114 IPR000315 GO:0008270
Pte7g00780 388 SMART bboxneu5 24 71 IPR000315 GO:0008270
Pte7g00780 388 ProSiteProfiles CCT domain profile. 318 360 IPR010402 GO:0005515
Pte7g00780 388 MobiDBLite consensus disorder prediction 193 241 - -
Pte7g00780 388 Pfam B-box zinc finger 69 114 IPR000315 GO:0008270
Pte7g00780 388 CDD Bbox1_BBX-like 28 71 - -
Pte7g00780 388 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 29 373 IPR045281 GO:0009909
Pte7g00780 388 Pfam CCT motif 318 360 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00780 Pte-Chr7 31108925 31110889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00780 25 389 C2C2-CO-like Transcription Factor Family AT3G02380 53.659 1.44e-129 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Pte7g00780 zf-B_box 3.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00780 K12135 - jre:109001350 403.29