Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00762 ATGGCTTCAATAGTTTTCCCTTCACCTTCAGCAGCATCACCGTCTTCTGCATTCTCACCCCCAACTTTGTCAGCATCCCCATTAAATTCTTCGAAGGGAGTATTATCTCCTACAGCTTCTCAGCCTGATCAAACAACTGAAACCCCTGGGGTTTCGAGTCCTTCTAGCTCTTCCGCTCCACCTCCTTCTACATCAAAAGTTCCTGCTACACTTCCTCCTTCTCCTCCACTTTCACTTCCTTCAACTTCACCACCACCACCGCCAGTTACCTCAGCTCCACCACCTTCAGTTCCAGTACCTCCTCCACGAACAACACCAGCATCTCCACCACTATCAACTCCAGCTTCTCCACCCCCATCACCTCCCTTATTGCCGCCGCCACCATCAAATCCTGCAACACCACCCCCATCACAATCTACTGTCCCTCCTAAAAAAATTTCTTCTCCTCCTCAAAGTTCATCTCCACCAGCACCAGTTGTAGGATCCCCACCATCTCCAATACCTCTTGCTTTGTCTCCCTCTCGTCCTCAAGCTCTTTCCCCTGCTGCTGCTCCTCCTCCAATTAATCCCGTCACGCCGACTCCAAACAGAGAGCTACCAGCTAAATCTCCTCCACCTGCTTTGGCCACACCTCCTCCATCAGGCTCTCAATCTTATCCCCCTCCTCTTTCATCAGATGGCCCACCAGGACCTGCAGTACCATCTTCTCCTTCTTCCATACCCTCAACCAATTCACCTCCTTCAATTGCTTCGCCTGTGCCTCCTAGTGATTTAAAACCATCAAGAAGTCCTCCCTTGTCACCGTTACCTAGTCTTCTAACTGAGAAGCCCACTGCAAGATCTATTGATGGTGTCTCCTCAAATGATTCATCCACAAATAAAGGTGGTATTAGCACTGGAGAAGGAGTGGCAATTGGCGTCGCAGTTGGTTTTGTTATGCTCAGTCTTCTTGTCATGGCTGTATGGTTTATAAACAAGCAAAAAAGAAGAACAGGATCTAAGGGCAGGTATCCCTGGTCTTCTCCAGCTGTCCCATCTCAAAATTCAGCTACAGTGTTCCTAAAGCCAAATTCACATGCTCTATTCTATGGAAGTGTATCTGGTAGTGAGTTGATGTATTCACCATCAGAGCAAGGAGGAGTGAGCAACTCAAAAGCATGCTTCACATATGAAGAGCTAGTTCAAGCCACAAAAGGTTTTTCAGAACAAAATCTATTGGGTGAAGGAGGATTTGGTTGTGTCTTTAAAGGTCTTATCTCAGATGGAAGGGAAGTTACTGTGAAACAGTTAAAGATTGGAAGTGGACAAGGTGAGCGAGAGTTCATAGCCGAAGTTGAGATCGTTAGCCGAGTACACCATAGACATTTGGTTTCTTTGGTGGGTTACTGCATATCTGAACATCAGAGGTTGCTTGTTTATGAATATGTCCCAAACAATACCCTACACAATCATCTACATGTTGTTGATAAACCTGTTATGAGTTGGGGAACTAGAGTCAGAGTTGCAGCTGGTTCAGCTCATGGAATAGCTTATTTACATGAAGACTGTAATATTCTTCTTCCTTTTTCACTTGTCAAATTTTTTATTAAGATATTTTGA 1599 0.4547 MASIVFPSPSAASPSSAFSPPTLSASPLNSSKGVLSPTASQPDQTTETPGVSSPSSSSAPPPSTSKVPATLPPSPPLSLPSTSPPPPPVTSAPPPSVPVPPPRTTPASPPLSTPASPPPSPPLLPPPPSNPATPPPSQSTVPPKKISSPPQSSSPPAPVVGSPPSPIPLALSPSRPQALSPAAAPPPINPVTPTPNRELPAKSPPPALATPPPSGSQSYPPPLSSDGPPGPAVPSSPSSIPSTNSPPSIASPVPPSDLKPSRSPPLSPLPSLLTEKPTARSIDGVSSNDSSTNKGGISTGEGVAIGVAVGFVMLSLLVMAVWFINKQKRRTGSKGRYPWSSPAVPSQNSATVFLKPNSHALFYGSVSGSELMYSPSEQGGVSNSKACFTYEELVQATKGFSEQNLLGEGGFGCVFKGLISDGREVTVKQLKIGSGQGEREFIAEVEIVSRVHHRHLVSLVGYCISEHQRLLVYEYVPNNTLHNHLHVVDKPVMSWGTRVRVAAGSAHGIAYLHEDCNILLPFSLVKFFIKIF* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00762 532 SMART tyrkin_6 400 528 IPR020635 GO:0004713|GO:0006468
Pte7g00762 532 Gene3D Transferase(Phosphotransferase) domain 1 376 525 - -
Pte7g00762 532 MobiDBLite consensus disorder prediction 1 64 - -
Pte7g00762 532 SUPERFAMILY Protein kinase-like (PK-like) 380 519 IPR011009 -
Pte7g00762 532 MobiDBLite consensus disorder prediction 65 171 - -
Pte7g00762 532 MobiDBLite consensus disorder prediction 247 271 - -
Pte7g00762 532 Pfam Protein tyrosine and serine/threonine kinase 403 515 IPR001245 GO:0004672|GO:0006468
Pte7g00762 532 MobiDBLite consensus disorder prediction 179 236 - -
Pte7g00762 532 FunFam Proline-rich receptor-like protein kinase PERK8 372 475 - -
Pte7g00762 532 ProSiteProfiles Protein kinase domain profile. 400 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g00762 532 MobiDBLite consensus disorder prediction 1 297 - -
Pte7g00762 532 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 309 517 IPR047117 -
Pte7g00762 532 MobiDBLite consensus disorder prediction 280 297 - -
Pte7g00762 532 PRINTS Proline rich extensin signature 57 78 - -
Pte7g00762 532 PRINTS Proline rich extensin signature 13 29 - -
Pte7g00762 532 PRINTS Proline rich extensin signature 80 96 - -
Pte7g00762 532 PRINTS Proline rich extensin signature 42 54 - -
Pte7g00762 532 PRINTS Proline rich extensin signature 97 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00762 Pte-Chr7 30682736 30685752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00762 302 517 Trihelix Transcription Factor Family AT1G26150 53.670 4.09e-72 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pte7g00762 PK_Tyr_Ser-Thr 5.4e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00762 - - gmx:100784873 353.984