Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00752 ATGGCTGTTCCCTTTTTGCCCAGTAATCATACTATTGGGTCGATCCCTCAAGCTGCTATCAATTTTGCTGTCAATGATAGTAAGCTGAGCAATGGTAATGGAGACCATTTCGGTCTGTCCAATTTTCTAGGCAGGAAACCTGTCAAGAAAGACAGACACAGCAAGATTTGCACAGCTCAGGGTGTCAGAGACCGCAGAGTGAGATTATCCATTGGCATCGCCCGCAAGTTCTTTGATCTCCAAGACATGTTAGGGTTTGACAAAGCTAGCAAAACCCTTGAGTGGCTGCTTAACAAGTCCAAGAAAGCAATTAAAGAACTTGCTAAGACAAAGCAAAATTCAAGTGGTGGGGTTGCAGCCAAATGTTTGTCTTCCTCTTCAGAATGTGAAGTGGTTTCAGGTATCAATGAAGGTGAAGAACTTCTACAAGGGGTTGGTGCTTGCAACAAACCACTGATGCTGGGGGTTGATAAAGACAGTAGGAAGTTGAAAAGGACACAGTCTGAGATAGCAAAGGAGTCAAGGGCGAAGGCAAGAGCAAGAGCAAGGGAAAGGACCAGAGACAAGATTTGTACTAGGTTGCATGATTCTTCTACTTCAAGAAGATGCCCTGCAGCCTCACAAATAGTTCACCATTCTAGGTCACTGATGCACACTGCTGAAGCTAGTACTGACAAGCCAAGCAAGTTAGTTGCAGAAATCGGACATTATGATCTTCAACTAGCAGATGCTCATCAAGTTCAAAGAGAAAAAGTTCTGGAGGAACCAGTTGTGATGAAAAAGAAGCCAAAGCTATCTTTGATGTCAAGCTCTGGACAAAGCCTAATGGTCTCCAAGGATGAAAGATTCAACCACGGCAATTTTAATTGCAACTCCTTGTTCCCGAATTTCATCACTCCCAATTGGGATGTCAGTGGTGCCACTGCACGTACTAGCTCTTGTGCCATCTCTGATGTGAATCTATCCACAGAACTTCAAATATTTGGAAAGCCATGGGATGTCTATGACAGCCAACGTTTGAACTAG 1026 0.4386 MAVPFLPSNHTIGSIPQAAINFAVNDSKLSNGNGDHFGLSNFLGRKPVKKDRHSKICTAQGVRDRRVRLSIGIARKFFDLQDMLGFDKASKTLEWLLNKSKKAIKELAKTKQNSSGGVAAKCLSSSSECEVVSGINEGEELLQGVGACNKPLMLGVDKDSRKLKRTQSEIAKESRAKARARARERTRDKICTRLHDSSTSRRCPAASQIVHHSRSLMHTAEASTDKPSKLVAEIGHYDLQLADAHQVQREKVLEEPVVMKKKPKLSLMSSSGQSLMVSKDERFNHGNFNCNSLFPNFITPNWDVSGATARTSSCAISDVNLSTELQIFGKPWDVYDSQRLN* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00752 341 ProSiteProfiles R domain profile. 172 189 IPR017888 -
Pte7g00752 341 Coils Coil 163 183 - -
Pte7g00752 341 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 44 245 IPR005333 GO:0003700
Pte7g00752 341 ProSiteProfiles TCP domain profile. 49 107 IPR017887 -
Pte7g00752 341 Pfam TCP family transcription factor 48 192 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00752 Pte-Chr7 30060145 30061265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00752 10 191 TCP Transcription Factor Family AT1G67260 43.077 4.04e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte7g00752 TCP 6.5e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00752 - - gmx:100801549 215.698