Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00744 ATGGGTTCCCTTCGAAGCATTATTCTTTATGTGATTTTGTGGCATACATGGAAGGCTTCTGCTATCAAAGACCAAGAATGGCAGTCTGCCACTGGAACTTACTCCAAGAAAACAGATGGGTTCATCATTATTGAAGGAGCCTGTGGATATGGAGACCTTCACAAGACAAAGTATGGAAAATACAGTGTTGAACTGAGCACAATGTTGTTCAATAGAGGCAGTGCCTGCGGGGCTTGCTATGAGATCAAATGCGTTGATCATATATTGTGGTGTTTGCAACGCAACACGTCTGTGAGGAGGCTACTGATTTCTGCCCTCCAAATTATGGACTTTCAGGCTTTCAGCTGA 348 0.4368 MGSLRSIILYVILWHTWKASAIKDQEWQSATGTYSKKTDGFIIIEGACGYGDLHKTKYGKYSVELSTMLFNRGSACGACYEIKCVDHILWCLQRNTSVRRLLISALQIMDFQAFS* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00744 115 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Pte7g00744 115 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Pte7g00744 115 PRINTS Expansin/Lol pI family signature 44 62 IPR007118 GO:0005576
Pte7g00744 115 SUPERFAMILY Barwin-like endoglucanases 18 92 IPR036908 -
Pte7g00744 115 PANTHER EXPANSIN-A15 14 94 IPR002963 GO:0009664
Pte7g00744 115 Gene3D - 13 102 IPR036908 -
Pte7g00744 115 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 115 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00744 Pte-Chr7 29184299 29184728 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00744 6 98 Expansin Gene Family AT4G38210 47.368 1.31e-24 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00744 - - pop:7481679 147.902