Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00716 ATGCTTATACCAGAGGGAAGCATGCAAGGAACAATGGCTTCGTTGACTTCCCTAGTGAATTTGGTAGGTTTAGTGAGTGGGAGTTCATCTGAGAGGTCTCATTCTCTTATTAGAAGAGTTTCTGTTTCCAAAGGAAGCGTTAGGAGTAGAAAGAGATGGCATTATGTGTCGTTGTCTGTATGTAGATGTTCCATCACAACAACTGATATTGTATCCGAGCAAAGCAATACCGTATCCCTTCATTCTAACGATAGTAGAGGCATTAAAGATGGGGTTGATGATGCTGGTTTTGTGCTTAAGCCTCCTCCCAAGCCTGTTTTGAAGTCCCCGGATTCAAAGGGCAATCCTTTGTTGGGCACGAATTCAACAAGTCGGAGGGTCGGTGGGAGTACTGGTGATTCTAATGATAAAGAGTTAAGTGAAGAAGAGAAGAAAAAGGTAATTGAGTCACTTGGAGAGGTGCTGGAAAAGGCTGAGAGACTGGAAAAGCCAAACTTCACTAGTAAAAGAGATAATGGATTAATAGGTAAATCAACAGCGAAAAATACAAATACAAATATGAGCACAGAATCCTCAGATACACCTGAAGTAGGTGCAGGAAGTAAGAAGTCTAAAACTTTGAAAAGTGTTTGGCGTAAAGGGGACGCTGTTGCAGCTATTAAGAAAGTCGTTGAACAAGTGCCTAAAACTGATAACAAGGTAGTGAAGGAAGCACCTCAGATAGGGGGAGGACAAAATTTAACCTTGCAATCTGGTGCTGTGGAAGCTCCGAAACCACCTTCGGCACCTCAACCTAGGTTACAAGCTAAACCTTCCGTAGCTCCTCCTCCCACAGTCAAGAAACCTGTCATCTTGAGGGATGTGGGAGCAGCTAAGAAGCCATCTGTCATTGATCAAGATGATACACGTTCTGACACCAAAGAAAAAAAGCCTATATTGATTGATAAATATGCTTCTAAGAAAGCACTATTAATAGCTGAGGATGTTTTGGCCCCCAGGAAGCCAGGAAAGGGTCCTCCCTCCAGAAAATTCAAGGATGATTACCGTAAGAAGAATGATTCAGGTGGGGGAGGACAAAGAAGACGAATGTTTGCAGATAATGAGGTTGATATCGCAGACGAGGATACTTCAGAACTTAATGTATCTATTTCTGGTTCAAGGAAAGGGAGGAAATGGAGTAAAGCAAGTCGAAAGGCAGCAAGAATGCAGGCTGCCAGGGATGCAGCTCCTGTGAAAGTGGAAATTCTTGAGGTTGGTGAGGGTGGAATGGCGATAGACGAATTAGCCTACAACCTTGCGATTGGTGAAGGTGAAATTCTTGGATATTTATACTCCAAAGGGATTAAGCCAGATGGTGTTCAAACTCTGGATAAAAATATGGTCAAGATGATTTGTAAAGAGTATGATGTAGAAGTATTGGATGCTGACCCTGTCAAAGTTGAGGAAATGGCAAAAAAAATGGAAGTTCTTGATGAAAAGGATCTTGACAAACTGAAAGCCAGGCCCCCTGTCATTACTATAATGGGTCATGTGGATCATGGAAAAACAACTCTTTTGGATCACATTCGCAATAGCAAGGTAGCTGCCTCAGAGGCAGGTGGGATTACACAAGGAATTGGTGCCTACAAAGTGCTTGTACCAATGGATGGAAAATCACAGCCATGTGTTTTCCTTGACACTCCTGGGCATGAGGCATTTGGAGCAATGAGAGCTCGTGGGGCTAGGGTAACGGACATTGCCATCGTTGTTGTGGCTGCAGATGATGGAATTCGACCTCAAACAAGTGAAGCTATTGCGCATGCCAAAGCTGCAGGAGTACCAATAGTCATTGCTATTAACAAGATAGATAAGGATGGTGCAAATCCAGAACGAGTCATGCAAGAACTTGCTTCTGCTGGTCTAATGCCTGAAGAATGGGGTGGTGACATCCCGATGGTTCAGATAAGTGCTCTTAAGGGTCAGAATATTGACGAACTTTTGGAAACGGTTGTGCTTGTTGCTGAGTTGCAAGAGCTGAAGGCTAATCCTGATAGAAGTGCAAGGGGCACAGTTATTGAGGCAGGTCTTGATAAGTCCAAGGGGCCATTTGCTACATTTATTGTGCAAAATGGAACCCTAAGAAGGGGAGATGTAGTGGTTTGTGGAGAATCCTTTGGAAAGGTACGGGCCCTATTGGATGATGCGGGGAAGCGTGTTGATGTAGCTGGCCCTTCCATACCTGTACAGGTTCTCGGATTGAATAATGTCCCAATTGCTGGAGATTTGTTTGAGGTTGTTAATTCCCTTGACACTGCTCGTGAAAAGGCAGAGATACGTGCTGATTCTTTACGTAATGAACGTATATTAGCTAAAGCTGGAGATGGCAAAGTTACACTTTCATCTTTGGCTTCTGCGGTTTCATCAAGAAGGCTTTCTGGACTGGACTTGCACCAACTAAATATAATTTTGAAAGTTGATGTTCAGGGATCTATTGAAGCTGTCAAACAAGCATTACAGGCACTTCCACAAGACAACGTCACTCTGAAATTTCTCCTGCAAGCAGCAGGCGATATAAACACTAGTGATATAGACCTTGCTTTTGCTAGTAAAGCCATAATCTTTGGATTTAATGTAAAAGCCCCAGGTTCAGTGAAGAACTATGCAGAGAACAAAGGTGTTGAAATTCGGCTTTATAAAGTTATATATGAACTGATTGATGATGTGCGCAATGCTATGGAAGGTCTTCTAGATCCTGTTGAGGAACGAGAAACAATTGGTTCAGCAGAAGTCAGGGCTGTGTTCAGCAGTGGTAGTGGTCGTGTGGCTGGATGTATGGTAGTGGAAGGAAAGATGTTAAAAAGCTGCGGCGTCAGAGTTATTAGAAAAGGCAGAGAAATTCATGTTGGGGTTCTTGATTCATTGAGAAGGGTTAAAGAGATTGTAAAAGAGGTTAATGCTGGTCTAGAATGCGGAATTGCAGTAGAAGACTATGATGATTGGCAGGAAGGAGACAAGATCGAGGCCTTCAACACAATTCAGAAGAAACGAACCCTCGAAGAAGCATCAGCTTCAATGGCAGCTGCAGTAGAACAAGTTGCAACTGGATTCTAA 3090 0.4314 MLIPEGSMQGTMASLTSLVNLVGLVSGSSSERSHSLIRRVSVSKGSVRSRKRWHYVSLSVCRCSITTTDIVSEQSNTVSLHSNDSRGIKDGVDDAGFVLKPPPKPVLKSPDSKGNPLLGTNSTSRRVGGSTGDSNDKELSEEEKKKVIESLGEVLEKAERLEKPNFTSKRDNGLIGKSTAKNTNTNMSTESSDTPEVGAGSKKSKTLKSVWRKGDAVAAIKKVVEQVPKTDNKVVKEAPQIGGGQNLTLQSGAVEAPKPPSAPQPRLQAKPSVAPPPTVKKPVILRDVGAAKKPSVIDQDDTRSDTKEKKPILIDKYASKKALLIAEDVLAPRKPGKGPPSRKFKDDYRKKNDSGGGGQRRRMFADNEVDIADEDTSELNVSISGSRKGRKWSKASRKAARMQAARDAAPVKVEILEVGEGGMAIDELAYNLAIGEGEILGYLYSKGIKPDGVQTLDKNMVKMICKEYDVEVLDADPVKVEEMAKKMEVLDEKDLDKLKARPPVITIMGHVDHGKTTLLDHIRNSKVAASEAGGITQGIGAYKVLVPMDGKSQPCVFLDTPGHEAFGAMRARGARVTDIAIVVVAADDGIRPQTSEAIAHAKAAGVPIVIAINKIDKDGANPERVMQELASAGLMPEEWGGDIPMVQISALKGQNIDELLETVVLVAELQELKANPDRSARGTVIEAGLDKSKGPFATFIVQNGTLRRGDVVVCGESFGKVRALLDDAGKRVDVAGPSIPVQVLGLNNVPIAGDLFEVVNSLDTAREKAEIRADSLRNERILAKAGDGKVTLSSLASAVSSRRLSGLDLHQLNIILKVDVQGSIEAVKQALQALPQDNVTLKFLLQAAGDINTSDIDLAFASKAIIFGFNVKAPGSVKNYAENKGVEIRLYKVIYELIDDVRNAMEGLLDPVEERETIGSAEVRAVFSSGSGRVAGCMVVEGKMLKSCGVRVIRKGREIHVGVLDSLRRVKEIVKEVNAGLECGIAVEDYDDWQEGDKIEAFNTIQKKRTLEEASASMAAAVEQVATGF* 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00716 1029 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 807 919 IPR036925 -
Pte7g00716 1029 NCBIfam translation initiation factor IF-2 421 1011 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Pte7g00716 1029 CDD mtIF2_IVc 919 1001 - -
Pte7g00716 1029 FunFam Translation initiation factor IF-2 808 913 - -
Pte7g00716 1029 MobiDBLite consensus disorder prediction 114 130 - -
Pte7g00716 1029 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 168 1017 IPR015760 -
Pte7g00716 1029 MobiDBLite consensus disorder prediction 330 365 - -
Pte7g00716 1029 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 500 673 IPR000795 GO:0003924|GO:0005525
Pte7g00716 1029 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 491 676 IPR027417 -
Pte7g00716 1029 Hamap Translation initiation factor IF-2 [infB]. 38 1009 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Pte7g00716 1029 MobiDBLite consensus disorder prediction 164 205 - -
Pte7g00716 1029 MobiDBLite consensus disorder prediction 171 199 - -
Pte7g00716 1029 Gene3D Translation factors 913 1010 - -
Pte7g00716 1029 ProSitePatterns Initiation factor 2 signature. 962 984 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Pte7g00716 1029 Gene3D - 808 912 IPR036925 -
Pte7g00716 1029 MobiDBLite consensus disorder prediction 258 278 - -
Pte7g00716 1029 FunFam Translation initiation factor IF-2 914 1010 - -
Pte7g00716 1029 NCBIfam small GTP-binding protein domain 503 663 IPR005225 GO:0005525
Pte7g00716 1029 MobiDBLite consensus disorder prediction 293 308 - -
Pte7g00716 1029 Pfam Elongation factor Tu GTP binding domain 505 666 IPR000795 GO:0003924|GO:0005525
Pte7g00716 1029 PRINTS GTP-binding elongation factor signature 608 617 IPR000795 GO:0003924|GO:0005525
Pte7g00716 1029 PRINTS GTP-binding elongation factor signature 572 583 IPR000795 GO:0003924|GO:0005525
Pte7g00716 1029 PRINTS GTP-binding elongation factor signature 556 566 IPR000795 GO:0003924|GO:0005525
Pte7g00716 1029 PRINTS GTP-binding elongation factor signature 504 517 IPR000795 GO:0003924|GO:0005525
Pte7g00716 1029 MobiDBLite consensus disorder prediction 235 308 - -
Pte7g00716 1029 FunFam Translation initiation factor IF-2 676 794 - -
Pte7g00716 1029 CDD IF2_mtIF2_II 680 774 IPR044145 -
Pte7g00716 1029 MobiDBLite consensus disorder prediction 78 144 - -
Pte7g00716 1029 MobiDBLite consensus disorder prediction 339 365 - -
Pte7g00716 1029 Pfam Translation-initiation factor 2 806 901 IPR023115 -
Pte7g00716 1029 CDD IF2_eIF5B 503 669 - -
Pte7g00716 1029 FunFam Translation initiation factor IF-2 497 675 - -
Pte7g00716 1029 Coils Coil 759 779 - -
Pte7g00716 1029 SUPERFAMILY Translation proteins 914 1009 IPR009000 -
Pte7g00716 1029 Gene3D - 497 675 IPR027417 -
Pte7g00716 1029 Gene3D Translation factors 676 790 - -
Pte7g00716 1029 SUPERFAMILY Translation proteins 676 760 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00716 Pte-Chr7 27983719 27993264 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00716 501 903 Eukaryotic Initiation Factors Gene Family AT1G21160 27.557 1.23e-27 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00716 K02519 - qsa:O6P43_001164 1411.36