Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00705 ATGGCAAACATTGATAATTACTATGCTGCTGAAACTGATGTCATAGCCAAAACCAGCAGTGGCATGATACCATTGAAGCTCTTTGGTATCAACATTCACAATCATCAGAATAACGATACTGCATGCGACAACTCTAAAGATTTGGAGTTGCGTAATTCTTCTGCATCACAGGGATCAGAGACACTCAAACCCATCATCGATGGTGGTCGCAAGTATGAGTGCCAATACTGTAACAAAGGATTCGCCAATTCACACGCACTGGGAGGCCACCAAAACGCACACAAGAAAGAGAGACGGCTATTGAAGCGTGCACAAATGCAAGCAAGTCTGGACTTTGCCGCTTCACATCTTCAAAACCCTTTGATATCAGCTATCACATCGCCGCACCACCTTCTTGTCGGCTCAGCAGCAGAACCTTCCTCGTGGCTATACATGAATCATGGAGGTACGGTTGGCTCCTTCAGTGGAGGTTATCATTATTCAGCAGGATCAACAGTAGTCCCACGAAGAAGGGTCTATGCCAGTGAATTTGAAGAGACTTTGTTCTTTCGTCATGAGAACTCTATGCCCCAGTTGAATGGCTTTGCTGACCGTGGTGGTGGGCATCATGGCGAAAGAGGCCTGGGTTTGGATTTACATCTTAGCCTTGGACCTTCGTCCAAGACTTGA 669 0.4634 MANIDNYYAAETDVIAKTSSGMIPLKLFGINIHNHQNNDTACDNSKDLELRNSSASQGSETLKPIIDGGRKYECQYCNKGFANSHALGGHQNAHKKERRLLKRAQMQASLDFAASHLQNPLISAITSPHHLLVGSAAEPSSWLYMNHGGTVGSFSGGYHYSAGSTVVPRRRVYASEFEETLFFRHENSMPQLNGFADRGGGHHGERGLGLDLHLSLGPSSKT* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00705 222 PANTHER ZINC FINGER PROTEIN 5 22 220 IPR044299 GO:0010090
Pte7g00705 222 SUPERFAMILY beta-beta-alpha zinc fingers 68 99 IPR036236 -
Pte7g00705 222 ProSitePatterns Zinc finger C2H2 type domain signature. 74 94 IPR013087 -
Pte7g00705 222 Gene3D Classic Zinc Finger 42 119 - -
Pte7g00705 222 ProSiteProfiles Zinc finger C2H2 type domain profile. 72 99 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00705 Pte-Chr7 27610561 27611229 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00705 25 218 C2H2 Transcription Factor Family AT1G67030 40.758 4.41e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte7g00705 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00705 - - cave:132182758 167.933