Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00677 ATGGATGACAAGCCTTCTATGTTTCATGACGCTTTGGCTCTCCAAGCTGCTTTTTTCAGTTTACAGACTGGCTGTGGAAGCACCATGCGAAAGAAAAGCATCATAGTGAATCTCCTTCGTTCTTCCCGAGAGAAAGAGATGAAGTTTCTTGTTCGGACTTTGGTCAGAAATTTGCGTATTGGAGCTATGTTGAGAAGTGTGCTTCCTGCATTGGCTCGAGCTGTTGTAATGAACTCGTGCTCCAAATATCATGGAGAAGAAATAGTTGAGAATATGAAGGAGAAGCTTCAGCATGTTTCTGCGTCAGTGATCGAAGCATATAACATAGCCCCCAGTTTGGATTTGGTTGTACCATCTCTCATGGACAAAGGCATTGAGTTCTCTGCCTCAAGTTTGTCAATGGTCCCAGGGATACCCCTGAAGCCTATGCTTGCAAAAATCACCAATGGAGTTAGAGAAGCAGTGAAGATATTTCAAAACAAAGCATTCACATGTGAATATAAATATGATGGCCAGCGTGCACAAATTCACAAACTGGTAGATGGATCTATTCGTGTTTTCTCTCGAAATGGAGATGAAACAACATCAAAATTTCCAGATCTGATTGGCATAATCAAGGGTTGCTGTAAACCTGAAGCAGTAACTTTCATAGTGGATTCTGAAGTTGTTGCCATTGACAGGAAGAGAGAAAATAGGCTTTTGCCTTTCCAGGAACTATCTTCTCGGGCAAGGGGAAGCAGAGGTGGTGTATTAGATATGGACAGCATCAAGATTCTTGAGTATTTTTATTTGGGAGATCTAAGCTTAAGTGAAGAATGA 819 0.4151 MDDKPSMFHDALALQAAFFSLQTGCGSTMRKKSIIVNLLRSSREKEMKFLVRTLVRNLRIGAMLRSVLPALARAVVMNSCSKYHGEEIVENMKEKLQHVSASVIEAYNIAPSLDLVVPSLMDKGIEFSASSLSMVPGIPLKPMLAKITNGVREAVKIFQNKAFTCEYKYDGQRAQIHKLVDGSIRVFSRNGDETTSKFPDLIGIIKGCCKPEAVTFIVDSEVVAIDRKRENRLLPFQELSSRARGSRGGVLDMDSIKILEYFYLGDLSLSEE* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00677 272 Gene3D DNA ligase/mRNA capping enzyme 142 263 - -
Pte7g00677 272 ProSitePatterns ATP-dependent DNA ligase AMP-binding site. 166 174 IPR016059 GO:0003909
Pte7g00677 272 Pfam ATP dependent DNA ligase domain 142 246 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Pte7g00677 272 PANTHER DNA LIGASE 1/3 FAMILY MEMBER 22 246 - -
Pte7g00677 272 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 137 246 - -
Pte7g00677 272 Pfam DNA ligase N terminus 22 72 IPR012308 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Pte7g00677 272 SUPERFAMILY ATP-dependent DNA ligase DNA-binding domain 22 125 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Pte7g00677 272 Gene3D - 16 141 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00677 Pte-Chr7 25092462 25129854 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00677 22 272 Core DNA Replication Machinery Family AT1G08130 35.798 6.11e-45 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00677 - - cave:132180567 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte7g00677 7 25092462 25129854 Pte7g00677 7 25092462 25129854 RCT