Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00673 ATGTGGTTGATTAAAATGGCAGATACTGAAGATATTCAACCTCTTGTTTGTGATAATGGAACCGGAATGGTTAAGGCTGGTTTTGCTGGTGATGATGCTCCTCGAGCTGTCTTTCCTAGCATTGTTGGTCGCCCTCGTCACACTGGTGTGATGGTTGGAATGGGCCAAAAAGATGCTTATGTTGGTGATGAAGCGCAATCTAAGAGAGGAATTCTAACTCTCAAATACCCAATTGAGCATGGTATAGTGAGTAATTGGGATGACATGGAAAAGATTTGGCATCATACGTTCTACAACGAACTCCGTGTTGCACCTGAAGAACATCCAGTTCTCTTAACTGAGGCTCCTCTTAATCCCAAGGCCAATCGCGAGAAGATGACCCAAATCATGTTTGAGACTTTCAATACCCCTGCTATGTATGTGGCCATCCAAGCAGTTCTTTCTCTTTATGCTAGTGGGCGCACAACAGGTATTGTGTTGGACTCTGGTGATGGTGTAAGTCATACAGTTCCCATTTACGAGGGTTATGCCCTCCCACATGCCATCCTACGTCTCGACCTGGCTGGCCGTGATCTTACTGATCACTTGATGAAAATTCTAACTGAGCGTGGGTATTCATTCACCACAACAGCAGAACGTGAAATTGTGAGGGACATGAAGGAGAAGTTGGCTTACATTGCTCTTGACTATGAGCAGGAACTAGAGACATCCAAGACCAGTTCGGCAGTGGAGAAAAGCTATGAATTGCCTGATGGACAAGTAATCACCATTGGTGCCGAGCGTTTTAGATGCCCTGAGGTTCTGTTCCAACCATCTATGATTGGTATGGAAGCAGCAGGCATTCATGAGACCACATACAACTCCATAATGAAGTGTGATGTGGATATCAGGAAGGACCTTTATGGCAACATTGTGCTCTCTGGAGGTTCAACTATGTTCCCCGGTATTGCTGATAGAATGAACAAGGAAATCTCAGCTCTTGCTCCAAGCAGCATGAAGATTAAAGTGGTGGCACCACCCGAGAGAAAGTACAGTGTCTGGATTGGTGGTTCGATCTTGGCATCCCTTAGCACATTCCAGCAGATGTGGATTGCGAAGGCAGAATATGATGAATCAGGTCCATCAATTGTTCATAGGAAATGCTTCTAA 1149 0.4508 MWLIKMADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETSKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMNKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00673 382 ProSitePatterns Actins signature 2. 363 371 IPR004001 -
Pte7g00673 382 PANTHER ACTIN 14 375 IPR004000 -
Pte7g00673 382 ProSitePatterns Actins signature 1. 60 70 IPR004001 -
Pte7g00673 382 CDD NBD_sugar-kinase_HSP70_actin 15 188 - -
Pte7g00673 382 Gene3D Actin; Chain A, domain 4 187 278 - -
Pte7g00673 382 ProSitePatterns Actins and actin-related proteins signature. 111 123 IPR020902 -
Pte7g00673 382 FunFam Actin, alpha skeletal muscle 8 172 - -
Pte7g00673 382 FunFam Actin, alpha skeletal muscle 335 382 - -
Pte7g00673 382 Gene3D - 145 345 - -
Pte7g00673 382 FunFam Actin, alpha skeletal muscle 260 334 - -
Pte7g00673 382 Pfam Actin 10 382 IPR004000 -
Pte7g00673 382 SUPERFAMILY Actin-like ATPase domain 11 160 IPR043129 -
Pte7g00673 382 PRINTS Actin signature 56 67 IPR004000 -
Pte7g00673 382 PRINTS Actin signature 33 42 IPR004000 -
Pte7g00673 382 PRINTS Actin signature 243 259 IPR004000 -
Pte7g00673 382 PRINTS Actin signature 122 135 IPR004000 -
Pte7g00673 382 PRINTS Actin signature 68 90 IPR004000 -
Pte7g00673 382 PRINTS Actin signature 147 166 IPR004000 -
Pte7g00673 382 SUPERFAMILY Actin-like ATPase domain 154 382 IPR043129 -
Pte7g00673 382 SMART actin_3 12 382 IPR004000 -
Pte7g00673 382 Gene3D - 15 376 - -
Pte7g00673 382 FunFam Actin, muscle 187 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00673 Pte-Chr7 24563501 24565834 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00673 6 383 Cytoskeleton Gene Families AT3G12110 96.296 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00673 K10355 - qsu:112027658 753.821