Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00659 ATGAATCCTATGATACATTGGAACCCGGTTCTTCAACCGCAAGACATGGCAAGATTTTCAGTTGGCGGTGACGAGGGTGAAGGGTCAAGCAGTCCAAGACCCAAGAGACTCAGATTGACCCCCAGATTCACTATCCGCTGCAACAACTCCGATGGCCGCCGACTTTCACCACAGCCGGATGGAGAGCGAGACGCACCTGTAGACTCTGGTTATGTCGACCAAGAGGGAGAAGGAAGTAGAGATGAAATTTTGGGAAGTGACCATGATCATAGTGGAGATGTTGACGATGATGATGATGACGATGAAGAGGAAGATTGTGAAGATGTTGGGTCATTAGTCAACACCAACAATCATTCAAGAGTAGAAGTTGGTGGTGGAGGACAAGGGCAAGGGCAAAGTCTGGACGGTGGTTGTTCTACTGCTCCGGGTGATGTCAATGTCCCTAATGGAGTGGGACCCACTGCCATGGCTGCACCAGTCTCTGTGGTTCTAAGCGACCCAGAAGTGTTGGATTGCTTAATTTGTTGTGAACCCTTATCTGCTCCTGTCTTTCAGTGTGAAAATGGGCATGTTGCTTGCTCTTCCTGCTGCAGCCGACTACATAACAAATGTCCAACTTGTTCTATGCCCATTGGTTATAACAGATGCCGAGCCCTTGAGAAGGTGCTAGAATCTATCAAAATGGTATGCCAAAATGCAAAGTATGGCTGTAAAGAGTTGCTAAATTATGGTAAGAAAAATGAGCATGAGAACACCTGCAAGCATATGCCATGCTTGTGTCCACATTCAGGCTGCAAGCACACAGCATCATCATTTGCACTAGCGATGCATTTAAGCTCCAAGCATTTGTCCAATATATATGCCTTCCAGTATAACAAGGTCTTCCGTATGTCGGTACCTGTTGCATGTAGAACCTTTATATTACAAGGGGAAGACGACCATGTTCTATTTATTGTCAACAAAAAAGTCGACCGTTTGGGGAGTACTGTTACACTGAGTTGTATTGGTCCGCACATATCAAAAGAAGGGTATCATTATGTTCTCATGGTGAAATCTGAAGACGGCTTGTTATCTCTGCAATCTACCACAAAAGCCATGCAGGGCCAGACCAATTATGTTCCTTCGACTGTATTCCTTTTAGTCCCAAATGATTTTTACGGCGCAGGAAAGCATATTGACTTCAGTGTTCACATATCAAACCATGGTACTTTGCGAGCCATAGATCAATAG 1230 0.4512 MNPMIHWNPVLQPQDMARFSVGGDEGEGSSSPRPKRLRLTPRFTIRCNNSDGRRLSPQPDGERDAPVDSGYVDQEGEGSRDEILGSDHDHSGDVDDDDDDDEEEDCEDVGSLVNTNNHSRVEVGGGGQGQGQSLDGGCSTAPGDVNVPNGVGPTAMAAPVSVVLSDPEVLDCLICCEPLSAPVFQCENGHVACSSCCSRLHNKCPTCSMPIGYNRCRALEKVLESIKMVCQNAKYGCKELLNYGKKNEHENTCKHMPCLCPHSGCKHTASSFALAMHLSSKHLSNIYAFQYNKVFRMSVPVACRTFILQGEDDHVLFIVNKKVDRLGSTVTLSCIGPHISKEGYHYVLMVKSEDGLLSLQSTTKAMQGQTNYVPSTVFLLVPNDFYGAGKHIDFSVHISNHGTLRAIDQ* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00659 409 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 220 278 IPR013083 -
Pte7g00659 409 Pfam Seven in absentia protein family 215 367 IPR018121 GO:0005737|GO:0006511|GO:0007275
Pte7g00659 409 SUPERFAMILY TRAF domain-like 226 398 - -
Pte7g00659 409 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 151 400 IPR044286 -
Pte7g00659 409 MobiDBLite consensus disorder prediction 1 145 - -
Pte7g00659 409 ProSiteProfiles Zinc finger RING-type profile. 172 208 IPR001841 -
Pte7g00659 409 MobiDBLite consensus disorder prediction 92 109 - -
Pte7g00659 409 CDD RING-HC_SIAHs 170 208 - -
Pte7g00659 409 ProSiteProfiles Zinc finger SIAH-type profile. 225 283 IPR013010 GO:0008270
Pte7g00659 409 MobiDBLite consensus disorder prediction 56 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00659 Pte-Chr7 23889021 23891092 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00659 168 282 C3H Transcription Factor Family AT2G41980 40.171 1.72e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00659 K04506 - qsu:112007121 299.671