Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00654 ATGGACGTTGAGTACAGGGCATCTTCCTCGTTGGAACAGTGCCGGATTTGCCATGATGAAGATGAAATTTCAAACATGGAAACGCCCTGTGATTGTTGTGGCAGCTTGAAGTATGCACATCGCAATTGTCTTCAAAGATGGTGTAATGAAAAAGGTGACACCTTATGTGAGATTTGCCTGCAGCAATTTAGACCTGATTATGCAGCAGCTCCTCTTTTATTCAGTTATGGTGGTATCCCGTTATATCTTAGTTCTGGTCATATGGGAGATTGGGAGACTTTCAGAAGGGACTTGAATAATCGTCAAATTATGGAAATGATATATGCAGCGAGTCATGAATCTACAGATGCTGAGTTCTTTGAACCCTCAAGAAGAAGCGTGATTTGCTGCCGGTTTATTGCTGTTATTTTCATTCTTCTTCTGGTTCTACGGCATACTCTTTCGATTTTAGTTAGTGAAGCTGGGGAGTACTCATTGACATTGGTTCTGTTACTGATAATGGCAACGATTGGAATACTGTTGCATATCTATGTCTTCGTTAGAGCATTCGCAGCCATCCAACATAGATGGGATCATCAGGTATTCACAAATTTAAAGATTTATCTAAATCTTGGAAATATAGAAGGAATTGGACTGAAGGGTGATAACACATTCATGCAACATAATATGTCAGCATTCAAATCTCCTCAACTGTTCAACTCTTGA 705 0.3972 MDVEYRASSSLEQCRICHDEDEISNMETPCDCCGSLKYAHRNCLQRWCNEKGDTLCEICLQQFRPDYAAAPLLFSYGGIPLYLSSGHMGDWETFRRDLNNRQIMEMIYAASHESTDAEFFEPSRRSVICCRFIAVIFILLLVLRHTLSILVSEAGEYSLTLVLLLIMATIGILLHIYVFVRAFAAIQHRWDHQVFTNLKIYLNLGNIEGIGLKGDNTFMQHNMSAFKSPQLFNS* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00654 234 SMART ringv_2 13 60 IPR011016 GO:0008270
Pte7g00654 234 ProSiteProfiles Zinc finger RING-CH-type profile. 6 66 IPR011016 GO:0008270
Pte7g00654 234 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 70 IPR013083 -
Pte7g00654 234 Pfam RING-variant domain 14 59 IPR011016 GO:0008270
Pte7g00654 234 SUPERFAMILY RING/U-box 11 64 - -
Pte7g00654 234 Pfam Protein of unknown function (DUF3675) 65 182 IPR022143 -
Pte7g00654 234 CDD RING_CH-C4HC3_MARCH 14 59 - -
Pte7g00654 234 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 8 193 IPR033275 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00654 Pte-Chr7 23597588 23600360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00654 12 75 C3H Transcription Factor Family AT2G37950 38.806 1.96e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00654 - - qsa:O6P43_005661 247.284