Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00629 ATGTTTCATGGCAACTATTCCTCAAGTCTGCAGCAGCTTGAAGCTGTTTGCCAACTAGAGGATCTGAAATCAGCAAAGGAAAATGCGAACAAACGCTCCATTGAGTTTGCAGACAATAGGGGATTGTCAGAAGAGTTTGGAATGAATAAGAGAAGCAAATTTGAAAGTTTACAACCAAATAGACAACAAGAAACCAGAGAAGCATCTGTGCTTCAAGTGCAAGTGCCTGTGAGGAGAAGCCAAAAACTCACTGACAAGATCACAGCTTTGCAACAGCTGGTTTCTCCATATGGGAAGACAGATACTGCTTCAGTTCTTCAAGAGGCTTGTGTTTATATCAAACTCCTTCAAGAACAAATTAAGAATCTATTTCAGACAATGAGTAGCTCCTACAATTCATATAGAGAGCTACACAGTGAGGAATTTGAAGAGACGGCCCAAGACCTTAGAAGCAGAGGGCTATGTTTGGTTCCTATATCCATCACACAGAAAGCAACAATGGAAAATCGACCTGCATGCTTCCGTTCAACATAA 534 0.4101 MFHGNYSSSLQQLEAVCQLEDLKSAKENANKRSIEFADNRGLSEEFGMNKRSKFESLQPNRQQETREASVLQVQVPVRRSQKLTDKITALQQLVSPYGKTDTASVLQEACVYIKLLQEQIKNLFQTMSSSYNSYRELHSEEFEETAQDLRSRGLCLVPISITQKATMENRPACFRST* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00629 177 Gene3D - 73 141 IPR036638 GO:0046983
Pte7g00629 177 Pfam Helix-loop-helix DNA-binding domain 78 117 IPR011598 GO:0046983
Pte7g00629 177 CDD bHLH_AtbHLH_like 78 123 IPR045239 -
Pte7g00629 177 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 67 116 IPR011598 GO:0046983
Pte7g00629 177 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 78 128 IPR036638 GO:0046983
Pte7g00629 177 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 35 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00629 Pte-Chr7 20867027 20868778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00629 77 168 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 48.958 8.94e-22 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte7g00629 HLH 0.0001 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00629 - - vvi:100265056 157.147