Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00619 ATGTCACTCTACAGAGTTGCAGTAGGGACTCCAGGAGAGGCTGGCCAACCTGATGCTATAAGAGCTGCTTGTTCGGAGTTTTTCTCAACACTTATTTTTGTTTTTGCTGGTGAAGGCTCTGGCATGGCTTTCAACAAGATTACCAATAATGGGTCACCGACGCCAGCTGGGGTTATTGCTGCATCAGTGGCACATGCCTTTGGGCTGTTTGTAGCAATTTCTGTAGGTTCAAATAATTCTGGTGGCCATGTAAACCCTGCTGTCACATTTGGTGCCTTCATTGGTGGGAATATTACTTTGTTAAGGGGAATTCTTTATTGGATTGCCCAGTTGCTTGGCTCCGTCGTTGCTTGCATGCTACTCAAGTTTGCAACAGGCGGATTGGAAACATCAGCTTTCACACTCTCCTCTGGTGTATCGGTATGGAACGCACTAGTTTTCGAGATAGTCATGACCTTTGGGCTTGTGTATACAGTATATGCAACAGCACTAGATCCGAGGAAAGGGAATGTAGGCATTGTTGCCCCTCTTGCAATTGGTTTCCTCGTTGGAGCCAATATCTTGGCTGGTGGTGCTTTTGATGGAGCATGCATGAACCCAGCTGTGTCTTTTGGTCCTGCTTTAGTAAGCTGGTCATGGGATCACCATTGGGTATATTGGCTAGGACCACTGCTCGGTTCAGCAATAGCAGCCATTATTTATGACAATGTCTTCATTGGGGATTATGCGCAGGAGGTACTTCCAAGCAATGATTTTTAA 759 0.4598 MSLYRVAVGTPGEAGQPDAIRAACSEFFSTLIFVFAGEGSGMAFNKITNNGSPTPAGVIAASVAHAFGLFVAISVGSNNSGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACMLLKFATGGLETSAFTLSSGVSVWNALVFEIVMTFGLVYTVYATALDPRKGNVGIVAPLAIGFLVGANILAGGAFDGACMNPAVSFGPALVSWSWDHHWVYWLGPLLGSAIAAIIYDNVFIGDYAQEVLPSNDF* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00619 252 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Pte7g00619 252 PANTHER AQUAPORIN-8 7 240 IPR034294 -
Pte7g00619 252 SUPERFAMILY Aquaporin-like 17 245 IPR023271 -
Pte7g00619 252 Gene3D Glycerol uptake facilitator protein. 5 252 IPR023271 -
Pte7g00619 252 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte7g00619 252 FunFam Probable aquaporin TIP1-1 4 251 - -
Pte7g00619 252 Pfam Major intrinsic protein 16 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte7g00619 252 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte7g00619 252 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte7g00619 252 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte7g00619 252 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte7g00619 252 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte7g00619 252 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00619 Pte-Chr7 20071847 20072784 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00619 1 253 Major Intrinsic Protein MIP AT4G01470 74.704 1.16e-139 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00619 K09873 - twl:120006395 442.58