Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00606 ATGGTGGGCACAGACGATGCTCAGACCAATACTGGAGCTCCACCATGTCAGCTTCCTGGTACGAGTACGAGGAAAATGTTCTGGCGGTCGGCCTCTTGGTCCTCCTCGCGCACAGCTACAAACAATCCCGCAGATGTGGATGAGAAAGCTTTCATAGATCCAGATTATAATGGGCAACACCGAAGATTTCCCCAAGTTCCCTTAACCCCTCGATCTCAACAGAATTCTAAGGCACGGTCTTCTTTGCCACCACTACAGCCATTGTCCATTGCACGGCGGAGCTTTGATGAGTGGCCCAAAGCTGGCTCTGATGATATTGGTGAGTGGCCACACCCTCCCACTCCAAGTGGGCGTGCTAGTGGGGAGAGGTTGAAGCTGGATTTGTCATCAATTCAGCAAAACTTGGGCAAGAATGTTGGGCTTGTCAAGAGGGAGAAAATTGCTTTCTTTGACAAAGAGTGTTCAAAAGTGGCAGAGCATATATATCTTGGTGGGGATGCTGTTGCTAAGGACAGAGATATACTGAAACTGAATAGGATAACCCATGTTCTAAATTGTGTTGGTTTTGTTTGCCCTGAGTACTTTCAAGGTGATTTTGTGTATAGAACATTGTGGTTGCAGGATAGTCCGACAGAGGATATTACTAGTATATTGTATGATGTCTTTGATTATTTTGAAGATGTTAGGGAACAGGGCGGAAGGGTATTTGTGCATTGTTGTCAAGGGGTTTCTCGGTCAACATCCTTGGTGATTGCATATATGATGTGGAGGGAAGGACAGAGTTTTGATGATGCCTTTCAGTATGTGAAGGCGGCAAGAGGTATTGCTGATCCTAACATGGGATTTGCCTGCCAATTGTTACAGTGTCAAAAAAGGGTCCATGCCTTTCCACTTAGCCCCAGCTCATTGTTGAGAATGTATAGAATTGCTCCACATTCACCATATGATCCCTTGCATCTTGTCCCAAAAATGTTGAATGACCCCTTGCCATCTGCTCTGGATTCCAGGGGCACTTTTATTGTGCATCCACCATCTGCGATATATATGTGGGTTGGTAAAAATTGTGAACCTATCATGGAAAGGGATGCTAGGGGAGCTGTAGCTCAGATTGTTCGATATGAGAAAGTAAAGGGGCCTATTATAACAATTAAGGAGGGTGAAGAACCAGATTATTTCTGGGATGCATTTTCTAATCTTCTGCCATTGATGGACAAATATGGAAATGGAGGGAAGACATGTAATTCAGGTGTCAAATTATCCGCTGGTCAAAGGAAAGTGGATTTCTATGATGTTGATTTTGAGGTTTTCCACAAGGCAATCATGGGAGGCTTTGTGCCTCCTTTTGCAGCATCAGAGAATGCACACGAAACCCATCTGCCTGCTAGAGAAAGCAGTTGGAGTGACTTAAGGCGTAAATTTGCCTCTAGTGATATGAAGGAATTTGTGTCAGCACCCAAGTTATCATTTCCAAGGGTTTACTCAGATTCGATGATGCTAGCTCATTCTTCAATAAAGTCTTCACCATCTTCATCATCATCATCTTCGACCCCATATCTTTCCCCCGATTCTATTTCTACTGATTCAAGCAATAATTCAAAACATTTCTCAGAATCATCCTTGGATTCTCCTTCTAACGTTTCATTATCTCATCCTGCATCATCCTTGTCTAATTTCGCTAGCATGTCACTTGTTTCAGCAAGATGTTCTTCATCCATTCCTAACAATGCTGAAATTCATCATGTAAATTTGACATCACAATCATGTTCTCCATCAGTTTCCTCATCTTCAAAAAACGCTTCACCTTCCCTTGCAGAGCGCAGAGGTAGTTCGTCAAAGTCTTTGAAGTTGCCATTGGTAACCAATAAACCAAGGGTGAGAAATAGTCAATCAAATTTCCTTTCTGGCCAAGAAGAAAATATCATAACAAGCAGCAATAGAAGCTCTATGAGTGAGCCTGAGGCGATTGGAAACAACTTGCAAACAGACGATGATTTTAAATATGGAGAGGTGAATTTGACTCAACTGTGTGAATTAGATATATTTCCTGGCGTAGTAGCTAATTCTTATTCCTTGGGTAACAAAGACAATTGCAATAAAAATGGATATGAAGCTTCACTAAGTTGTCCTTCAGGAGATGGCAGTTTGTCCACTGAACTGAAAGAAATTGATGGAAGTGAAAATATAATATGTAACCTTAAGCAGACCTTAGTATTTCGTTGGCCCAGTTTAGAGAAGATTGCAACATTTGGTATAAATGACCTAGATTCTAAGGCTGCTTTCATTATTTTCTCACCAAGTATGAAGTTAGAGCAAAATGAAGGAATGGTTTTGTATTTTTGGATAGGAAAATCTTTCACTCATGCTGGATCTCAAATTAGATTAAATAGTGGTAGGGAGTTAGATAATCTAGAGGTGGTTGAAAAGAATCCGATTGGTTGTGAAATCCTCACCCGAATGGGCCTGCCAGAGGACATCATCATTAAGATTGTTAAAGAAAATGATGAACCGGTGGAACTTCAGGCTATGTTGAGTATGTTGTAG 2541 0.416 MVGTDDAQTNTGAPPCQLPGTSTRKMFWRSASWSSSRTATNNPADVDEKAFIDPDYNGQHRRFPQVPLTPRSQQNSKARSSLPPLQPLSIARRSFDEWPKAGSDDIGEWPHPPTPSGRASGERLKLDLSSIQQNLGKNVGLVKREKIAFFDKECSKVAEHIYLGGDAVAKDRDILKLNRITHVLNCVGFVCPEYFQGDFVYRTLWLQDSPTEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYMMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPKMLNDPLPSALDSRGTFIVHPPSAIYMWVGKNCEPIMERDARGAVAQIVRYEKVKGPIITIKEGEEPDYFWDAFSNLLPLMDKYGNGGKTCNSGVKLSAGQRKVDFYDVDFEVFHKAIMGGFVPPFAASENAHETHLPARESSWSDLRRKFASSDMKEFVSAPKLSFPRVYSDSMMLAHSSIKSSPSSSSSSSTPYLSPDSISTDSSNNSKHFSESSLDSPSNVSLSHPASSLSNFASMSLVSARCSSSIPNNAEIHHVNLTSQSCSPSVSSSSKNASPSLAERRGSSSKSLKLPLVTNKPRVRNSQSNFLSGQEENIITSSNRSSMSEPEAIGNNLQTDDDFKYGEVNLTQLCELDIFPGVVANSYSLGNKDNCNKNGYEASLSCPSGDGSLSTELKEIDGSENIICNLKQTLVFRWPSLEKIATFGINDLDSKAAFIIFSPSMKLEQNEGMVLYFWIGKSFTHAGSQIRLNSGRELDNLEVVEKNPIGCEILTRMGLPEDIIIKIVKENDEPVELQAMLSML* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00606 846 Gene3D Severin 305 399 IPR029006 -
Pte7g00606 846 MobiDBLite consensus disorder prediction 1 86 - -
Pte7g00606 846 SMART dsp_5 153 292 IPR020422 GO:0006470|GO:0008138
Pte7g00606 846 PANTHER MKPA PROTEIN 6 840 - -
Pte7g00606 846 MobiDBLite consensus disorder prediction 66 83 - -
Pte7g00606 846 Pfam Dual specificity phosphatase, catalytic domain 161 291 IPR000340 GO:0008138|GO:0016311
Pte7g00606 846 SUPERFAMILY Actin depolymerizing proteins 300 403 - -
Pte7g00606 846 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 212 273 IPR000387 GO:0016311|GO:0016791
Pte7g00606 846 ProSitePatterns Tyrosine specific protein phosphatases active site. 237 247 IPR016130 GO:0016311|GO:0016791
Pte7g00606 846 Gene3D Protein tyrosine phosphatase superfamily 132 295 IPR029021 -
Pte7g00606 846 MobiDBLite consensus disorder prediction 585 657 - -
Pte7g00606 846 MobiDBLite consensus disorder prediction 585 660 - -
Pte7g00606 846 MobiDBLite consensus disorder prediction 100 122 - -
Pte7g00606 846 MobiDBLite consensus disorder prediction 1 43 - -
Pte7g00606 846 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 150 294 IPR029021 -
Pte7g00606 846 MobiDBLite consensus disorder prediction 504 547 - -
Pte7g00606 846 CDD DSP 154 288 - -
Pte7g00606 846 ProSiteProfiles Dual specificity protein phosphatase domain profile. 153 295 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00606 Pte-Chr7 19047182 19053806 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00606 1 189 Protein tyrosine phosphatase (PTP) family AT3G55270 66.667 2.55e-73 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00606 - - qsa:O6P43_005717 1060.06