Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00559 ATGGTTACTACTGTTGAAGTATGGCATCAGCCTATGGCTGTGGAGAAATACCTTGGTGACGATGATAATGCTCAGCAACTCTTCAGTAGCAGAAGTGGCTACGATAAACAAACTGGAATTTACCACTCACTAGTCAAACTTGGCTATGACTATGAAATCCCAACACAGCTTGAACTTGATACTGCGACATTTGTGCTATCACAGTTCCCTGGAGCTGGATTTGCTGAATGGAGAGTTGCATACATTGATTCTACAACAAAACAACGTATAACCTATGCCGAACTTCGCCAAGCAATTCACTCCCTTGCTTCAGGGTTGTGCTATGGACTTGACGTGCGTAAAGGAGATGTGGTGTTTGTTCTGTCTCCTAACTCACTCTTGTATCCTATCATATGCCTTGCGGTGCTGTCAATTGGAGCAGTTTTGACTACTGCTAATCCCCTCAATACGATTTCCGAAATCGCCAAGCAAGTAAGTGATTCCCGTGCAAAGCTAGCCATTTCATCACCTGAAGAGCTCCACAAGTTGATCCCAACTGGGGTTCCTGTAATTCTCACCTCTCGTCCGGATGACGGAGTCATGTTATCTGTGCAAGAATTGATTGAATGCTGTACTACTGAACCGCTTGAGATTCCAAGAGTTTCTATTGCTCAATCTGACACTGCAGCAATACTATACTCTTCAGGAACCACAGGAACAAGCAAAGGGGTGGTGCTCACTCATGCAAATTTCATTTCAATCATGACATTACTCAGATGGTCAGTGGATGCAACTTCCTCACATGATGATGTCTTTTTGTGCTTCCTTCCAATGTTTCACATCTACGGACTCGCATTCTTTGGATTAGGATTGCTGTGCTCAGGTATCACCACAGTACTGATGCAGAAATTCGACTTCATAGCCATGCTTGATGCAATACAAGAATACAAGGTCAGCAACATCCCAGCAGTACCCCCAGTGATTCTTGCACTAGTGAAGTACTCAAGCCAAGCTGGACGTGACTTGTCGAGCTTAAGAAGGATCGGTTCAGGTGCTGCACCATTAAGTAAAGAATTGGCTGTAGCTTTTCGCCAATTGTTTCCATGGGTTGAGCTTAGACCAGGTTATGGATTAACTGAAAGCTGTGGAGCAACATCTTTCTTTGTCTGCGACAGAGATGCTAAGGCTAGACCTGCATCATGTGGGAGGTTACTCCCAACATTCTGGGCTAAAGTTGTAGACCCTGACACAGGAAAGGCCTTGCCTCCTCTAAAAGAAGGAGAGCTCTGGATAAAAAGCCCTAGTATCATGAAAGAATATCTAGGAAACATGGAAGCAACAGCTGCAACGTTCGATTTATCTGGGTGGCTGAAGACCGGTGATCTTTGCTATTTTGATGAGGATGGATTTCTCTACATAGTTGATAGAATTAAGGAGCTTATCAAGCACAATGGCTATCAGGTGGCTCCAGCTGAATTGGAAGCAATACTTGTAACTCATCCCAGTATTCTTGATGCAGCTGTGATACCTATTGAAGATGAAGAAGCTGGGCAGATTCCAATGGCATGCATAGTGAAAGAAGCTGATTCTAAGCTTAGAGAAGAAGAAGTCATGCAGTTTGTTTCGAGTCAGGTGGCACCATATAAGAAAGTAAGAAGAGTGAGTTTTATCAGTGCCGTTCCAAGATCTTCTGCAGGCAAAATTTTGAGGAAAGATTTGGTTTTACAGAGCAAACATCAACTTATCTCCAAGCTGTGA 1737 0.4364 MVTTVEVWHQPMAVEKYLGDDDNAQQLFSSRSGYDKQTGIYHSLVKLGYDYEIPTQLELDTATFVLSQFPGAGFAEWRVAYIDSTTKQRITYAELRQAIHSLASGLCYGLDVRKGDVVFVLSPNSLLYPIICLAVLSIGAVLTTANPLNTISEIAKQVSDSRAKLAISSPEELHKLIPTGVPVILTSRPDDGVMLSVQELIECCTTEPLEIPRVSIAQSDTAAILYSSGTTGTSKGVVLTHANFISIMTLLRWSVDATSSHDDVFLCFLPMFHIYGLAFFGLGLLCSGITTVLMQKFDFIAMLDAIQEYKVSNIPAVPPVILALVKYSSQAGRDLSSLRRIGSGAAPLSKELAVAFRQLFPWVELRPGYGLTESCGATSFFVCDRDAKARPASCGRLLPTFWAKVVDPDTGKALPPLKEGELWIKSPSIMKEYLGNMEATAATFDLSGWLKTGDLCYFDEDGFLYIVDRIKELIKHNGYQVAPAELEAILVTHPSILDAAVIPIEDEEAGQIPMACIVKEADSKLREEEVMQFVSSQVAPYKKVRRVSFISAVPRSSAGKILRKDLVLQSKHQLISKL* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00559 578 Pfam AMP-binding enzyme 78 475 IPR000873 -
Pte7g00559 578 ProSitePatterns Putative AMP-binding domain signature. 224 235 IPR020845 -
Pte7g00559 578 FunFam 4-coumarate--CoA ligase 2 472 573 - -
Pte7g00559 578 Gene3D - 472 574 IPR045851 -
Pte7g00559 578 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 35 567 - -
Pte7g00559 578 SUPERFAMILY Acetyl-CoA synthetase-like 78 567 - -
Pte7g00559 578 Gene3D - 51 471 IPR042099 -
Pte7g00559 578 CDD 4CL 53 566 - -
Pte7g00559 578 FunFam Long-chain-fatty-acid--CoA ligase FadD 52 471 - -
Pte7g00559 578 Pfam AMP-binding enzyme C-terminal domain 485 560 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00559 Pte-Chr7 12437080 12439719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00559 31 567 Monolignol Biosynthesis Gene Families AT1G20500 44.424 4.05e-158 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00559 K10526 - qsa:O6P43_004973 830.476