Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00558 ATGGTCCGAGAATCACCAACCTCACTTGCTCCAGGGTTCCGATTCCATCCGACTGATGAAGAACTCGTTCGATACTATCTCCGTCGGAAAATCTCCGGCAAACCTTTTCGGTTCGACCCAATCAGTGTGGTTGACATCTACCGATCTGAGCCTTGGGACCTTCCTGGTCAGTCGAAGCTGAAAAGTAGGGATTTAGAGTGGTATTTTTTCAGTGCATTGGATAAGAAATATGGTAATGGGTCAAGGACGAATAGGGCTACTGAGAAAGGGTACTGGAAGACTACTGGGAAGGATCGTCCTGTGAAGCATAAATCCAAAGCTGTTGGGATGAAGAAAACCCTTGTCTATCACATAGGTCGTGCACCTCACGGTACACGTACTAATTGGGTTATGCATGAGTACAAACTTGTGGATGATGACTCTCTTCTCAATCAAGGCACATCCCGGGATTCCTTCGTTTTATGTAGGATTTTCCAGAAAAGTGGCTCGGGACCTAAGAATGGGGAGCAATATGGGGCTCCTTTTATTGAAGAAGAATGGGAAGAAGATGAAAAAGAAGATTTTCTGCCTGGTGAAGATGCTTCGAGCAATGAAGTTCTAGCTGTTGATGATTTTTTTCTTGAAGCAAATGACCTTGATCAGAACTTCGATTTTCGTACTACATCTGAATGTGCTCCTCATCTATTGAACTTCTATCACGGGGAGAGTAGTAACTATGTTGAGAATTACGATGGTTCTGCTGTTATTGATCGAAAGCCTGTTGTTGATAGTGCTGAAGCATCTGGGCAATGTAATGATCAGTCTGGAGTCAGGGTTCAACCCCATACAATGGAATTCAGACCATCTGCAGGTACGAATCATCATTATGCTATGGAAGGCAATGCATTAGCAGATAATTTTGTTGGTCAACCAGTAGAGAATGAGAATCCTCTTGGCTTCTGTTACTCTGTTGATGATCTATTCTTGGATGCTACTCATAATCCAGTGGCTGATACTTGTGTTGGTGATGCGTCATATCTGGAAACCAATGATCTTGCAAATCCTATTGTGAAAGAGGATCCTGCTGGTTCTGATATGCTTGATGAGTATCTTTCATATTTTGACCCTGATGAAGACATTACCCAGTATATCAATTTTGATGTTCATGAAACAAGTGAAGACCTTATCCCTATTCAATCATGTCCCACTGATGAGCAGCTTGTTAATGATGTAATGGAGCCAATGGCCGTGGCATCAAGCTGTGATGTGATGGTACATGCTGACTTTGTAGGGTCATCTTCAAAGCAAAAGGCCGAGATGGTGAAATTGGACAAAGATATGAAATCTCCATGCTTAGAGAAAGCTAGTCACATGTTGGGGAGCATCCCTGCACCCCCTGCATTTGCTTCAGAGTACCCTACAAAAGATGATACTCTAAGGTTGCATGCTGCAGCACAATCTTCAAGTTCTGTGGACCTCATGGCTGCTATGATCAGAATAAGAAGCATTACTCTAAGAAGCTCTGGATCTTGCTATTCGTTTGGGAAGAATGGCAACGTTGATATCATTCTCTTGTCATCCATATTTCCATCTTACAATGTTGTGACTGAGGTCGCCACTGTGCCGCCATCTGGTATAATTTCAGGGAAGGCTACTTCTTTTGTGTTACATGGCTGGATGTTCTTAATGTTCTTTTGGGTTCTTGTACTTCCTGTGTTTTATATGATGGGGAACTTCATGTATACTGGCAAATGA 1734 0.4268 MVRESPTSLAPGFRFHPTDEELVRYYLRRKISGKPFRFDPISVVDIYRSEPWDLPGQSKLKSRDLEWYFFSALDKKYGNGSRTNRATEKGYWKTTGKDRPVKHKSKAVGMKKTLVYHIGRAPHGTRTNWVMHEYKLVDDDSLLNQGTSRDSFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEEDEKEDFLPGEDASSNEVLAVDDFFLEANDLDQNFDFRTTSECAPHLLNFYHGESSNYVENYDGSAVIDRKPVVDSAEASGQCNDQSGVRVQPHTMEFRPSAGTNHHYAMEGNALADNFVGQPVENENPLGFCYSVDDLFLDATHNPVADTCVGDASYLETNDLANPIVKEDPAGSDMLDEYLSYFDPDEDITQYINFDVHETSEDLIPIQSCPTDEQLVNDVMEPMAVASSCDVMVHADFVGSSSKQKAEMVKLDKDMKSPCLEKASHMLGSIPAPPAFASEYPTKDDTLRLHAAAQSSSSVDLMAAMIRIRSITLRSSGSCYSFGKNGNVDIILLSSIFPSYNVVTEVATVPPSGIISGKATSFVLHGWMFLMFFWVLVLPVFYMMGNFMYTGK* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00558 577 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
Pte7g00558 577 Pfam No apical meristem (NAM) protein 11 136 IPR003441 GO:0003677|GO:0006355
Pte7g00558 577 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 235 - -
Pte7g00558 577 FunFam Nac domain-containing protein 86 18 163 - -
Pte7g00558 577 ProSiteProfiles NAC domain profile. 9 160 IPR003441 GO:0003677|GO:0006355
Pte7g00558 577 SUPERFAMILY NAC domain 7 160 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00558 Pte-Chr7 12427366 12430787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00558 1 569 NAC Transcription Factor Family AT5G04410 45.238 4.03e-143 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte7g00558 NAM 1.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00558 - - qsa:O6P43_004975 576.244