Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00547 ATGTTAGACAACACGGGTCGTGATTCGATTTCAACACAGAGCAGTACTTCGAGTTCTTCAATGGGTAGTGAAAGCCTTTGCAGTAGTAGTTTCAGTCGTCTCTCTTTTGATTTCCATCCCAGTACTTCACCAGAAACCTTCGTTTTAAAACCACACCGGTCGTCTGACTTTGCTTACTCCGCTGTGTTCCACCGCAAAACCAACCTCACCTTCCGCGACTTCCGTCTTCTTCGCCGTATTGGTGCTGGTGATATCGGCACTGTCTATCTCTGCCGTCTCCGAAACTCAACCGCCCCCGACCCTGAGTACGAGCCTGACAACTCTTGCTTCTACGCCATGAAAGTCGTTGACAAAGAAGCTTTGGCTCTGAAGAAAAAAGTTCCCAGAGCTGAGATGGAAAGGAAGATTCTCAAGATGTTAGACCATCCCTTTTTGCCTACGCTGTTTGCCGAGTTTGAAGCTTCACATTTCTCTTGCATTGTCATGGAGTTTTGTCCTGGAGGTGACTTGCATTCTCTCAGACACAAGCAGCTTCACCGTCGTTTCTCTCTCACCTCTGCAAGGTTTTATGCTGCTGAGGTGTTGGTGGCATTAGAGTACCTGCACATGTTAGGAATCATATACAGAGACTTAAAGCCTGAAAATGTGCTAGTCAGATCAGACGGCCACATCATGCTTTCAGATTTTGATCTATCTTTATGCTCAGATGCTATCCCAGCCGTTGAATGGCCAGATTCCTCTCCAGATCCCGCATTCCCATCTACGCTGCCGTACAACCAGCCGCAGGCTAACTCTCGCTTCTCCTGCCTCTCTAGGCGCTTCAAGTTCCGGTCCCGGAAAGTGCAGACCCTCCAACCCAACCGGCTCTTTGTAGCGGAACCGGTTGATGCCCGATCTTGCTCATTCGTTGGGACCCACGAGTACGTCTCCCCTGAAGTCGCCTCCGGTAGGTCCCACGGCAATGCAGTGGATTGGTGGTCGTTTGGGATCTTTATCTACGAGATGATCTATGGCCGTACACCATTTGCAGCCTCATCGAATGAAGCTACACTGCGTAACGTCATAAAACAACCCGTGAACTTTCCTACTCCATCTCCATCCTGCTCGCTTGAACAACACGCGCGAGACCTCATCACCGCGTTGTTAAACAAGGATCCGAGTAGAAGACTCGGGTCGAAACGTGGAGCGGCCGAAATCAAGTCGCACCCGTTTTTTAAAGGACTCAACTTTGCGCTCGTACGGACGCTGACGCCACCTGAAGTGCCGGTTTTGAGGAGGCTTAAAACGACGCCGGTACCGTTTAGTAGTGCCATGAATAATAGTAGTGATGGAAACAGTATAAGGAAATCAACGGCCTTTGATTGCTTTTGA 1371 0.4953 MLDNTGRDSISTQSSTSSSSMGSESLCSSSFSRLSFDFHPSTSPETFVLKPHRSSDFAYSAVFHRKTNLTFRDFRLLRRIGAGDIGTVYLCRLRNSTAPDPEYEPDNSCFYAMKVVDKEALALKKKVPRAEMERKILKMLDHPFLPTLFAEFEASHFSCIVMEFCPGGDLHSLRHKQLHRRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVEWPDSSPDPAFPSTLPYNQPQANSRFSCLSRRFKFRSRKVQTLQPNRLFVAEPVDARSCSFVGTHEYVSPEVASGRSHGNAVDWWSFGIFIYEMIYGRTPFAASSNEATLRNVIKQPVNFPTPSPSCSLEQHARDLITALLNKDPSRRLGSKRGAAEIKSHPFFKGLNFALVRTLTPPEVPVLRRLKTTPVPFSSAMNNSSDGNSIRKSTAFDCF* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00547 456 Gene3D Transferase(Phosphotransferase) domain 1 165 232 - -
Pte7g00547 456 SMART serkin_6 74 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g00547 456 Gene3D Transferase(Phosphotransferase) domain 1 296 423 - -
Pte7g00547 456 MobiDBLite consensus disorder prediction 1 23 - -
Pte7g00547 456 MobiDBLite consensus disorder prediction 435 456 - -
Pte7g00547 456 Gene3D Phosphorylase Kinase; domain 1 72 164 - -
Pte7g00547 456 FunFam protein kinase PINOID 2 72 164 - -
Pte7g00547 456 ProSiteProfiles Protein kinase domain profile. 74 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g00547 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Pte7g00547 456 CDD STKc_phototropin_like 72 426 - -
Pte7g00547 456 MobiDBLite consensus disorder prediction 435 449 - -
Pte7g00547 456 PANTHER FLIPPASE KINASE 1-RELATED 15 425 - -
Pte7g00547 456 FunFam protein kinase PINOID 165 233 - -
Pte7g00547 456 FunFam serine/threonine-protein kinase D6PK-like 297 423 - -
Pte7g00547 456 SUPERFAMILY Protein kinase-like (PK-like) 56 436 IPR011009 -
Pte7g00547 456 Pfam Protein kinase domain 300 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g00547 456 Pfam Protein kinase domain 75 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00547 Pte-Chr7 11977112 11979608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00547 3 457 AGC Kinase Gene Family AT2G34650 66.811 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pte7g00547 Pkinase 1.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00547 - - qsa:O6P43_013066 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte7g00547 7 11977112 11979608 Pte7g00547 7 11977112 11979608 RCT