Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00523 ATGAGTCTGTATCTTGTGTGGGATCATTTCTTGTTGAGATACATGAGGTGCAGTCAAGTACCTGGTTACCAAGAGCCTTTGAAGTGTTTCCATTTCTCCAAGAAAGGGAAAGATGGGGAACCAAAGATCACAAAGTCAAAATCTTTACGATCCTCAACCTCAACTTTGATGTCAACTGATCGAGACATGCCACGGACAGACTCCAATTTCAATTCTCAGAATGTCTCAGAGATTAGCACGGAATCGTCAGTGAAATCCTTTGCAGTGCTGTCTCATATGCAGGTGAATCTGAGAGAATTCACTCTCACAGAATTGAAGACAGCAACAAAAAATTTTAGCCTCTCTGTCATGATTGGAGAAGGTGGGTTTGGTAGAGTGTATAGGGGTGTGATCAAGAGCTCTGAAGATTCACATAAGAAGATAGATATTGCTGTCAAACAGCTTAGTAGAAGAGGACTTCAGGGCCACAAAGAATGGCTGACAGAAGTAAATGTTATGGGGATTGTTGAACATCCAAATCTTGTCAAGTTACTGGGTTACTGTGCAGAAGATGATGAAAAAGGCATGCAGAGGTTGCTGGTATATGAATACATGCATAATAGGAGTGTCCTAGATCACTTGTCAAGTCGATCTCAAAATGCCCTTCCTTGGATCACAAGACTGAAAGTGGCTCAGCACACAGCCTGTGGCTTAGCATACATCCATGAGGAAATGGATTTTCAGCTAATCTTCAGAGATTTCAAATCCTCAAACATACTTTTGGATGATCAGTGGAATGCAAAACTATCAGATTTTGGATTGGCTAGGTTGGGGCCTTCAGATGGATTAACTCACGTCTCCACTGCGATTGTAGGAACTATAGGATATGCTGCTCCTGAATATATTCAGACTGGTCATCTCACATCCAAAAGTGATGTGTGGGGTTATGGCGTTTTCCTCTATGAACTCATCACAGGCAGACGCCCTTTAGATCGAAATCGTCCCAAGAATGAGCAGAAACTATTGAAATGGGTGAGGTCACATCTTTCTGACACAAACAAGTTTAAAATGGTGATGGATCCGAGGCTTGAAGGGAATTACTGCCTCAAGACTGCACAGAAACTAGCAGCGGTAGCTAACCGTTGCTTGATGCGACAACCTAAGTCACGTCCGAAAATGAGTCAAGTGTTGGAGATGGTCAACAGAATTATAGATGATGCAACAGATATAAGGGCTCCTCATGTCCCAGTGGCGAATTCAACCTCTGATTATGATTCCACAAAATCAATGAAACAGGGGTTTGAGATGTCTGTAGTCCCTATTACTGGAAACTTGGGTTGTCTAACTTGGGATACATTCAGACTTAGGACTTGTTGA 1356 0.4233 MSLYLVWDHFLLRYMRCSQVPGYQEPLKCFHFSKKGKDGEPKITKSKSLRSSTSTLMSTDRDMPRTDSNFNSQNVSEISTESSVKSFAVLSHMQVNLREFTLTELKTATKNFSLSVMIGEGGFGRVYRGVIKSSEDSHKKIDIAVKQLSRRGLQGHKEWLTEVNVMGIVEHPNLVKLLGYCAEDDEKGMQRLLVYEYMHNRSVLDHLSSRSQNALPWITRLKVAQHTACGLAYIHEEMDFQLIFRDFKSSNILLDDQWNAKLSDFGLARLGPSDGLTHVSTAIVGTIGYAAPEYIQTGHLTSKSDVWGYGVFLYELITGRRPLDRNRPKNEQKLLKWVRSHLSDTNKFKMVMDPRLEGNYCLKTAQKLAAVANRCLMRQPKSRPKMSQVLEMVNRIIDDATDIRAPHVPVANSTSDYDSTKSMKQGFEMSVVPITGNLGCLTWDTFRLRTC* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00523 451 Gene3D Transferase(Phosphotransferase) domain 1 198 410 - -
Pte7g00523 451 CDD STKc_IRAK 118 396 - -
Pte7g00523 451 Pfam Protein tyrosine and serine/threonine kinase 115 391 IPR001245 GO:0004672|GO:0006468
Pte7g00523 451 MobiDBLite consensus disorder prediction 37 74 - -
Pte7g00523 451 Gene3D Phosphorylase Kinase; domain 1 70 197 - -
Pte7g00523 451 MobiDBLite consensus disorder prediction 46 74 - -
Pte7g00523 451 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 198 406 - -
Pte7g00523 451 ProSitePatterns Protein kinases ATP-binding region signature. 118 146 IPR017441 GO:0005524
Pte7g00523 451 ProSiteProfiles Protein kinase domain profile. 112 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g00523 451 SUPERFAMILY Protein kinase-like (PK-like) 87 393 IPR011009 -
Pte7g00523 451 PANTHER OS01G0588500 PROTEIN-RELATED 69 395 - -
Pte7g00523 451 FunFam Serine/threonine-protein kinase BIK1 78 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00523 Pte-Chr7 10454548 10457767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00523 27 421 Glycoside Hydrolase AT3G07070 40.852 3.56e-96 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte7g00523 PK_Tyr_Ser-Thr 8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00523 - - qsa:O6P43_005017 605.905