Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00516 ATGAGAGTTATGTTAGACTTGAATAGCGAAGGAGAAGCACACAACACAAACACAACTACTTGCAATCAGGATTACAGAAGAAACTCACCAACCAAACAACTCAACTGGGCTCAAGTTTTGAAAGTGATAACTAGAGAAGGAAGGTTCCAATTTTGCAGCTCGGGTTTGCTATTTCAAAAGCGAAACCAGGAAAATCAAGAAGGAAACAAAAATATGATCGGGCCAGATTTCGTGGACGACATAGAATGCGGCAGCTTCTTCGACCACATTGACGACTTCCTCGACTTCCCTACCGAAGATGTCACCGTACCTTTGCCTTCTGACGCTGTCGGCAACTGTGACTCGTTACCGGACATTTGGAACCCTGTATCTGACTCGTTACCGGGCTCGGACTCGGTCTTCTCTGACCACAGTGCCTCCGACCTCCCTGCCAGCCTCTCTGTGCCGTATGAAGACATTGTTCAGTTGGAATGGATGTCAAAGTTTGTTGAGGATTCCTTCACTGGTGGAAGTCTTACAATGAAGAAAGAGGACATGTCCTCTGATGATGTCAACAAGGAATCAGGACACCAGCATTTCCAGACATCCAGTCCAGTTTCTGTTCTTGAAAGCAGCACCTCCTGCTCTGAGGAGAAGCCTTCAGGTTGCAGCCCAGAAGTTCTAGTGTTGGGACGCTGTGGACGGGCACGCAGTAAGCGTCCTCGCTCTCGCCCCGCAACTTTCAGTCACCGTCCGGCGATTCAGCTCATTTCCACGGTTAGTGAAACCGCATGGCCTTTCTTCTCCCCAAAAGCCTCTTCCGATGCAGAGAAATTTGCCGGATCTCGTCCTGTAGTTAAGCTGCCACAACATGTCTCTACAGAGCATACGAAGAAGAAGAAAAAAATAAAACACTCACTCCCCTTAGCTTCCCTGGAGACAAACCAGAATTCACCTTCACAAGCTGTGAGGAAATGCATGCATTGTGAGATAACCAAGACACCGCAATGGAGAGCAGGACCATTGGGCCCGAAAACCCTTTGCAATGCTTGTGGTGTTCGATACAAGTCTGGGCGACTTTTCCCAGAATACCGCCCTGCTGCGAGTCCGACCTTTGTTTCATCCATTCACTCCAATTCTCATAAGAAGGTTCTGGAAATGAGGAACAAGAACAAAGAGAATACTGCTCTTGACTCAAATGCTTTTCCAGAACTCATTCCAAATTCCAATAGTAGCCTGACTCTTGATTACATATGA 1236 0.4733 MRVMLDLNSEGEAHNTNTTTCNQDYRRNSPTKQLNWAQVLKVITREGRFQFCSSGLLFQKRNQENQEGNKNMIGPDFVDDIECGSFFDHIDDFLDFPTEDVTVPLPSDAVGNCDSLPDIWNPVSDSLPGSDSVFSDHSASDLPASLSVPYEDIVQLEWMSKFVEDSFTGGSLTMKKEDMSSDDVNKESGHQHFQTSSPVSVLESSTSCSEEKPSGCSPEVLVLGRCGRARSKRPRSRPATFSHRPAIQLISTVSETAWPFFSPKASSDAEKFAGSRPVVKLPQHVSTEHTKKKKKIKHSLPLASLETNQNSPSQAVRKCMHCEITKTPQWRAGPLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVSSIHSNSHKKVLEMRNKNKENTALDSNAFPELIPNSNSSLTLDYI* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00516 411 FunFam GATA transcription factor 308 394 - -
Pte7g00516 411 ProSiteProfiles GATA-type zinc finger domain profile. 313 349 IPR000679 GO:0006355|GO:0043565
Pte7g00516 411 MobiDBLite consensus disorder prediction 10 26 - -
Pte7g00516 411 PANTHER GATA TRANSCRIPTION FACTOR 72 389 - -
Pte7g00516 411 SMART GATA_3 313 363 IPR000679 GO:0006355|GO:0043565
Pte7g00516 411 Gene3D - 313 363 IPR013088 GO:0006355|GO:0008270
Pte7g00516 411 MobiDBLite consensus disorder prediction 1 26 - -
Pte7g00516 411 Pfam GATA zinc finger 319 352 IPR000679 GO:0006355|GO:0043565
Pte7g00516 411 CDD ZnF_GATA 318 375 IPR000679 GO:0006355|GO:0043565
Pte7g00516 411 ProSitePatterns GATA-type zinc finger domain. 319 344 IPR000679 GO:0006355|GO:0043565
Pte7g00516 411 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 317 376 - -
Pte7g00516 411 MobiDBLite consensus disorder prediction 190 213 - -
Pte7g00516 411 MobiDBLite consensus disorder prediction 180 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00516 Pte-Chr7 10086657 10094486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00516 90 385 C2C2-Gata Transcription Factor Family AT4G32890 34.653 1.52e-42 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pte7g00516 GATA 4.1e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00516 - - qsa:O6P43_005032 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte7g00516 7 10086657 10094486 Pte7g00516 7 10086657 10094486 RCT