Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00487 ATGGAATACAAAGTGGCAACTTCGACAGCAACCCCACTTGTTTCCAACAATGTTTTTCACACTGCTAAGTTTTTAGCTACCCCTCCTCCGTCTTCATCTCCGACATCTTCATCTCCTAGTACTCAATTGTTCCCATCGACCATTCATTCTCTTAATTCTCAGCAGTCTTCTCCTAGAGTGCCTGTTGTTGTTAGCCCCTGTGCAGCATGCAAAACCCTTCGTCGAAGATGTGTTGAGAAATGTGTCCTAGCTCCATACTTCCCTCCCACTGATCCATTCAAGTTCACCATGGCACACAGAGTCTTTGGAGCTAGCAATATCATCAAGCTCTTGCAGGAACTTCCAGAGGCTCAGAGAGCAGATGCAGTGAGCAGCATGGTTTATGAAGCTAATGCTAGAATCAGAGACCCAGTCTATGGCTGTGCTGGAGCAATATTTCAACTTCAGAAACAAGTAAGTGAGCTGCAAGCACAATTAGCCAAAGCCCAAGCGGATGTTGTGAACATGCAATGCCAGCAAGCCAACTTGGTGGCTCTAATTTGCATGGAGATGAGTCAATCACAAGACCTGCAAATGCTTCAGCCTCATTCTCAGTCTCAGTCACAGTCACATCTAGACATGACATGTTTCTTGGAAGACAATCTGGGTTCTGCTTGGGATCTTCTTTCGACATGA 675 0.4563 MEYKVATSTATPLVSNNVFHTAKFLATPPPSSSPTSSSPSTQLFPSTIHSLNSQQSSPRVPVVVSPCAACKTLRRRCVEKCVLAPYFPPTDPFKFTMAHRVFGASNIIKLLQELPEAQRADAVSSMVYEANARIRDPVYGCAGAIFQLQKQVSELQAQLAKAQADVVNMQCQQANLVALICMEMSQSQDLQMLQPHSQSQSQSHLDMTCFLEDNLGSAWDLLST* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00487 224 Pfam Lateral organ boundaries (LOB) domain 66 163 IPR004883 -
Pte7g00487 224 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 65 200 - -
Pte7g00487 224 MobiDBLite consensus disorder prediction 25 55 - -
Pte7g00487 224 Coils Coil 145 172 - -
Pte7g00487 224 ProSiteProfiles LOB domain profile. 65 166 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00487 Pte-Chr7 9102770 9104133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00487 62 224 AS2 family AT1G07900 65.680 6.95e-71 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte7g00487 LOB 3.7e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00487 - - gmx:100806667 278.1