Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00476 ATGGTATTCCTGTCATCATCATCATATGACAAATCTAGACAATACTTTCATGATGTAGTAGGAAGTCCCTATTATGTTGCTCCTGAAGTGTTGTTGAAGCAATATGGACGAGAAGTTGATGTATGGAGTGCTGGTGTCATCCTCTATATTTTGTTGAGTGGGGTTCCTCCTTTCTGGGCAGAAAGTGAAACAGGTATTTTCAAACAGGTATTGCATGGAAAACTGGATTTTAAATCTGATCCATGGCCCAGTATTTCGGAAAGTGCCAAGGATTTGATAAACAAGATGCTTGAAAGGGATCCTAGGCAAAGACTATCTGCCTATGAGGTCCTATGTCATCCTTGGATTCTAGATGACAGAGTTGCCCCAGACAAGCCTCTTGATCCAGCAGTATTGGCACGTTTGAAGCAGTTTTCAGCAATGAACAAACTTAAGAAGATGGCACTGCGTGTAATTGCAGAGAGGCTTTCGGAGGAAGAAATAGGAGGTTTGAAAGAGTTGTTCAAAATGATTGACACAGACAACAGTGGAACAATAACATTTGAAGAATTGAAAGAAGGGCTGAGAAAAGTGGGTTCAGATCTTATGGAATCTGAAATCAAGTCCCTTATGGAAGCAGCTGATATTGACAACAACGGAACAATAGACTATGGTGAATTTCTTGCTGCTACATTGCACTTGAACAAGATTGAGAGGGAAGAGAACCTACTAGCAGCCTTCTCCTATTTTGACAAAGACGGTAGTGGTTACATTACCATTGATGAACTTCAACTGGCCTCCAAAGAATTTAACCTAGGTGATGTCCGAGTGGATGATATAATCAAAGAAGTTGATCAAGACAATGATGGACGAATAGATTATTCTGAGTTTACGGCAATGATGAAAAAGGTTGATGGAGGAGTTGGCAGGAACAGGAGCAGAAGGGGAAGCTTGACCTTCAATTTAAGCGATGCTTTTCTTGCAAACAACTCATCCTAA 978 0.407 MVFLSSSSYDKSRQYFHDVVGSPYYVAPEVLLKQYGREVDVWSAGVILYILLSGVPPFWAESETGIFKQVLHGKLDFKSDPWPSISESAKDLINKMLERDPRQRLSAYEVLCHPWILDDRVAPDKPLDPAVLARLKQFSAMNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFEELKEGLRKVGSDLMESEIKSLMEAADIDNNGTIDYGEFLAATLHLNKIEREENLLAAFSYFDKDGSGYITIDELQLASKEFNLGDVRVDDIIKEVDQDNDGRIDYSEFTAMMKKVDGGVGRNRSRRGSLTFNLSDAFLANNSS* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00476 325 ProSiteProfiles EF-hand calcium-binding domain profile. 265 300 IPR002048 GO:0005509
Pte7g00476 325 CDD EFh 164 223 IPR002048 GO:0005509
Pte7g00476 325 ProSitePatterns EF-hand calcium-binding domain. 172 184 IPR018247 -
Pte7g00476 325 SMART serkin_6 3 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g00476 325 FunFam Calcium-dependent protein kinase SK5 26 121 - -
Pte7g00476 325 Pfam Protein kinase domain 11 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g00476 325 SUPERFAMILY Protein kinase-like (PK-like) 12 140 IPR011009 -
Pte7g00476 325 FunFam Calcium-dependent protein kinase 1 124 298 - -
Pte7g00476 325 ProSitePatterns EF-hand calcium-binding domain. 208 220 IPR018247 -
Pte7g00476 325 ProSiteProfiles EF-hand calcium-binding domain profile. 195 230 IPR002048 GO:0005509
Pte7g00476 325 PANTHER SERINE/THREONINE-PROTEIN KINASE 14 290 - -
Pte7g00476 325 Gene3D - 123 299 - -
Pte7g00476 325 Gene3D Transferase(Phosphotransferase) domain 1 3 121 - -
Pte7g00476 325 ProSitePatterns EF-hand calcium-binding domain. 278 290 IPR018247 -
Pte7g00476 325 ProSiteProfiles Protein kinase domain profile. 1 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte7g00476 325 ProSiteProfiles EF-hand calcium-binding domain profile. 159 194 IPR002048 GO:0005509
Pte7g00476 325 Pfam EF-hand domain pair 164 224 IPR002048 GO:0005509
Pte7g00476 325 Pfam EF-hand domain pair 234 295 IPR002048 GO:0005509
Pte7g00476 325 SUPERFAMILY EF-hand 140 297 IPR011992 -
Pte7g00476 325 SMART efh_1 269 297 IPR002048 GO:0005509
Pte7g00476 325 SMART efh_1 199 227 IPR002048 GO:0005509
Pte7g00476 325 SMART efh_1 235 263 IPR002048 GO:0005509
Pte7g00476 325 SMART efh_1 163 191 IPR002048 GO:0005509
Pte7g00476 325 ProSiteProfiles EF-hand calcium-binding domain profile. 231 259 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00476 Pte-Chr7 8632172 8635127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00476 7 319 EF-hand Containing Proteins AT1G35670 78.914 0.0 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte7g00476 Pkinase 9.3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00476 K13412 - qsa:O6P43_008002 535.413