Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00471 ATGGATTCAGAATCAAGTGTACCCCCAGGATTTCGGTTTCACCCAACGGAGGAAGAACTTGTTGGATACTATCTCAGGAGGAAGATAAACGCTCTGAAGATCGATTTAGATGTTATTGTCGAAATCGATCTCTACAAAATTGAACCATGGGATATACAAGATAGATGCAAGCTAGGGTATGATGAACAGAACGAGTGGTACTTCTTCAGTCACAAGGACAAAAAGTATCCAACGGGAACAAGAACTAATCGAGCCACTGCTGCTGGGTTCTGGAAAGCAACTGGGAGAGACAAGGCTGTGTTATCAAAAGACAGGATCATAGGGATGAGGAAGACATTGGTGTTCTACAAAGGACGTGCCCCAAATGGCAGGAAAACTGACTGGATAATGCATGAGTACAGGCTGGAGACCTCAGAACATGCATCTCCACAGGAAGAAGGATGGGTGGTGTGTAGAGCATTCAGAAAGCCAACTCCAAGTCAAAGGCCAAGCCTTGAAGCTTGGAATCAAGCATTTTTTAGATATCAGAACTATTCGAGGCTTCAATCATTTTCACCTTCAGAAAACGTTGTCGTAAATGCACCAGCACTGCCGACACATCTGGTTCATCCAGCTGATCATGGTGCTAGTTTCAGTCAGCAGTTTATCTCAGAAGAACATATTCAGCTTGTTCAAGACAATGTAGCTTTGGACAGCCAACGTATTGAGCTACCACCACTGGACAGTCCTAACACCCCCACAATTTCCACAAGTTTGGCTACTGAAGATAATTACAACGATGGAAAGGGCAATAATATTAACAGTGGCTATCATTGTCTTGATTGGAAAAGCTTGGATAACTTGCTCGCCTCACAAATGACAAATTCAAGTTACTATCAACCCAGTACTTCTATGGCCAGTATGATACCCCATAACCATGACATGCAAGCACAAAGTCATATTAGTAGTATACTTGGGTGCTATCCTGACTCATAA 975 0.4297 MDSESSVPPGFRFHPTEEELVGYYLRRKINALKIDLDVIVEIDLYKIEPWDIQDRCKLGYDEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVLSKDRIIGMRKTLVFYKGRAPNGRKTDWIMHEYRLETSEHASPQEEGWVVCRAFRKPTPSQRPSLEAWNQAFFRYQNYSRLQSFSPSENVVVNAPALPTHLVHPADHGASFSQQFISEEHIQLVQDNVALDSQRIELPPLDSPNTPTISTSLATEDNYNDGKGNNINSGYHCLDWKSLDNLLASQMTNSSYYQPSTSMASMIPHNHDMQAQSHISSILGCYPDS* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00471 324 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Pte7g00471 324 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Pte7g00471 324 Gene3D NAC domain 16 159 IPR036093 GO:0003677|GO:0006355
Pte7g00471 324 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Pte7g00471 324 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 241 - -
Pte7g00471 324 FunFam NAC domain-containing protein 16 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00471 Pte-Chr7 8465978 8468239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00471 4 325 NAC Transcription Factor Family AT1G71930 55.090 7.07e-122 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte7g00471 NAM 2.4e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00471 - - tcc:18592949 402.905