Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00461 ATGGGAGATCCAGACGAAGAGGAGCTTTTGAAGCTCAGCCTTGCAACTGGTGACAAGAAGAAGAAAAGAAAGGAAGGCACTGCTGCTTTGTGCCCTTTGAATTTCTACGAGGGTTTTGAAGGAAAAATATTTCATCTCCTTCAACTGAGGGAACATATGCTAAGACAAGATTGCAAGAGCAAAGGAGTAGTTGATTACGCACATGGTCAGAGACTCATTCATTTATTGCTCACAACCGCCACAGCAATTGATGAAAACAATGTGTATTCCGCCATGGAGTATCTGAGTGAGCTCTACCAAAGTGTAACCTTAACTGGTGACTCAGTACAAAGAGTGGTAGCATATTTCTCTGATGGATTGGCCGCAAGGCTTCTCACCCCAAGGTCTCAATTTTATGATGTACTAATGAAAGAACCAACAAGTGAAGAAGAATTCAAAGCATTCACAAACTTCTACCGTGTATCACCATACTATCAATTTGCTCATTTCACTGCAAATCAAGCTATAATAGAGGCCTTCGAGAATGAGGAAGAGATTAGCAACCGGGTATTACATGTAATTGACTTCGATGTTTCTTATGGCTTCCAATGGCCTTCTTTGATTCAGTCACTTTCTGAAAAGGCATCAACTGGTAATTGCATATATCTTCGGATAACTGGATTTGGAAGAAACTTGGAAGAACTACAAGACACAGAAGCCAGATTGGTTAGCTTCTCTAAGGGTTTTGATAATCTGGTCTTTGAATTTCAAGGGTTGTTGAGGGGGACATCATCTCTTGTAAACCTAAGGAGAAAAGGGAATGAGACATTAGTAGTGAACTTGGTTTTCCATTTAATTACATTGAATAAGTGTTTTAGCATTTCAGAGACATTGAAATTCATGCGGTCACTGAATCCCTCAATTGTTGTGTTGGTTGAACAAGATGGCAGCAATGGAAGTGCTACAAGCTTCTTGTCCAGGTTCATGGAGTCTTTGCATTACTTTGAAGCCATGTTTGATTCATTGGATGATTGCCTTCCACTTGAAAGCACTGAAAGATTGTGTATCGAAAAAAATCTTTTAGGGAAAGAAATCAAAAGCCTGCTCAACTATGACATGGGTTGTCTAAGTTGGTCCGGATATGACATGATAGAAACATGGAAGCGAAGCATGGAAAACCTTGGATTTACGGCAGGTAAGATAAGCTCAAAGGCTATAATCCAAGCAAAACTCCTTTTGAAGATTAGAACTCACTACTGCCCTCTTCAATTTGATGGAGAAGGTGGTGGTGGTGGTGGAGGGTTTAGGGTTTCCGAAAGAGATGAGGGAAGAGTTATTTCATTGGCTTGGCAAGACAGGTTACTGCTTACAGCTTCTGCATGGCACTGCCTATGA 1374 0.4076 MGDPDEEELLKLSLATGDKKKKRKEGTAALCPLNFYEGFEGKIFHLLQLREHMLRQDCKSKGVVDYAHGQRLIHLLLTTATAIDENNVYSAMEYLSELYQSVTLTGDSVQRVVAYFSDGLAARLLTPRSQFYDVLMKEPTSEEEFKAFTNFYRVSPYYQFAHFTANQAIIEAFENEEEISNRVLHVIDFDVSYGFQWPSLIQSLSEKASTGNCIYLRITGFGRNLEELQDTEARLVSFSKGFDNLVFEFQGLLRGTSSLVNLRRKGNETLVVNLVFHLITLNKCFSISETLKFMRSLNPSIVVLVEQDGSNGSATSFLSRFMESLHYFEAMFDSLDDCLPLESTERLCIEKNLLGKEIKSLLNYDMGCLSWSGYDMIETWKRSMENLGFTAGKISSKAIIQAKLLLKIRTHYCPLQFDGEGGGGGGGFRVSERDEGRVISLAWQDRLLLTASAWHCL* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00461 457 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 71 450 IPR005202 -
Pte7g00461 457 Pfam GRAS domain family 72 454 IPR005202 -
Pte7g00461 457 ProSiteProfiles GRAS family profile. 63 455 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00461 Pte-Chr7 7775625 7776998 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00461 80 454 GRAS Transcription Factor Family AT3G54220 36.815 1.88e-59 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte7g00461 GRAS 2.4e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00461 - - pop:18104478 593.964