Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00454 ATGGAGGATACACGTGAAGGTCAGGAGCTTTTGAAGCTTAGCCTCGCAGTTAATACAGACTCCGGTGAGGAGAGAAAGATGAACAAAAGAAAAAGAAGCAATATTGCTTTGAATTCTTCATTTGAAGGGTACGAAGGGAAGGTATTCTGGCTGCTGCAGATGAGGGAGCAGATGATCAAACAAGATCAGAAAAGGAAAGTGGTTGCTTCTGAAAATGGAAACGGTCTTCATCTGATCCATCTCTTGCTCCTGACTGCTACGGAAATTGATGAAAACAATGTGGAAATGGCGTTGGAGAATGTGAGAGAGCTCTATCAAAGTGTATCTCTATCTGGGGATTCAGTTCAAAGGGTTGTGGCTTATTTTGCAGATGGATTAGCAGCAAGACTCCTAACCAGTAAATCTCCATTTTATGACATGCTTATCAAGGAACCTACAGATGAAGAAGAGTTCTTAGCATTCACTGACCTTTACAAGGTTTCACCATATTATCAATTCGCTCATTTCACTGCTAACCAAGCAATTATGGAGGCCTTTGAGAGTGAAGAGCAATGGAACAACCGAGCCTTACATGTTGTGGATTTGGATGTTTCATACGGCTTTCAATGGCCTTCTCTTATTCAATCACTCTCAGAAAAAGCATCAAATACCAACAGAATATCACTAAGGATAACCGGGTTTGGGAAAAACATGGAGGAACTCCAAGAAACTGAATCCAGATTGGTGAGTTTCGCAAAGGGTTTTCGAAATGTGGTTTTCGAATTCCAGGGATTGTTGAGAGGTTCCAAGCTCGGTGGCATAAGGAAAAGGAAGAATGAAACAGTGGCAGCAAACTTGGTTTTCCATTTGAACACATTGGATAGCTATTCCGAGATATCTGACTCGTTGAAATTTGTGCATTCCCTTTCCCCGTCCGTTGTGACCTTGGTGGAACAAGAAGGTAGCAGAAGTGCGAAGAGCTTCCTGTCAAGATTCATGGAGTCACTGCAATACTTTGCAGCAATGTTTGATTCATTGGATGATTGTCTCCCACTTGACAGCACTGACAGATTCGGAATTGAGAAGAATCTTCTTGGTAAAGAGATCAAAACTGTACTCATCTCTGATGTGGACTCTTCAAATTGTCCCAAATATGAGAAGATGGAAACTTGGAAGGCAAGGATGGAGAGCCATGGATTTTCAGGAGTTAAGATAAGTTCCAAGTCTATAATACAAGCAAAGCTGCTTCTGAAGATGAGAGCTCAACATTGTCCAATCCAAATTGATAGAGAAGGTGGCGGCGGCGGCGGGTTTAGGATTACAGAAAGAGATGATGGAAATGCTCTCTCTTTAGGTTGGCAAGATAGGTTTCTACTCACAGCATCTGTATGGCACTGTATCTGA 1383 0.4208 MEDTREGQELLKLSLAVNTDSGEERKMNKRKRSNIALNSSFEGYEGKVFWLLQMREQMIKQDQKRKVVASENGNGLHLIHLLLLTATEIDENNVEMALENVRELYQSVSLSGDSVQRVVAYFADGLAARLLTSKSPFYDMLIKEPTDEEEFLAFTDLYKVSPYYQFAHFTANQAIMEAFESEEQWNNRALHVVDLDVSYGFQWPSLIQSLSEKASNTNRISLRITGFGKNMEELQETESRLVSFAKGFRNVVFEFQGLLRGSKLGGIRKRKNETVAANLVFHLNTLDSYSEISDSLKFVHSLSPSVVTLVEQEGSRSAKSFLSRFMESLQYFAAMFDSLDDCLPLDSTDRFGIEKNLLGKEIKTVLISDVDSSNCPKYEKMETWKARMESHGFSGVKISSKSIIQAKLLLKMRAQHCPIQIDREGGGGGGFRITERDDGNALSLGWQDRFLLTASVWHCI* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00454 460 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 63 453 IPR005202 -
Pte7g00454 460 Pfam GRAS domain family 78 457 IPR005202 -
Pte7g00454 460 ProSiteProfiles GRAS family profile. 69 458 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00454 Pte-Chr7 7536090 7537472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00454 81 457 GRAS Transcription Factor Family AT2G04890 33.679 1.35e-58 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte7g00454 GRAS 6.3e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00454 - - vvi:100242818 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte7g00454 7 7536090 7537472 Pte7g00454 7 7536090 7537472 RCT