Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00419 ATGTGCTTGCTAAAGGTGGCGAACCCAGGAGGCTCAGATGAGTACGTCAGCTTTACAGCTCAACATGGCGGATGTAGCAGTACTGGTAGGGCTGGTGGTGATGAGGAAGAAGAAACTAGATCATATGAAGCACATGAAGGAGCAGCAGCAGGAAGCTCAACTATAGCACACCCATCGCGACAATTGAACCTGCAACCACAGCAGCAAGGAGGAACGGGGCCTATACAGAATCCAATGATGTTTTCAGATTTTAGCAGAGTTGGGGAACAGACTGTTATGGTGTCAGCACTGACGCAAGTTGTGTCAGGACAGAGAGGCAGTCATGATGAATGGGTCTATCGAAGTGGTTTGCCTATGACATCAGGGTTTGGACAGATTGCTTCTCCAGTTTTGTCTGCTTATTCTTCTAGTACTTCAGGTTCTGGTGCCTTTGTTGGTTCTGGTTCTTGGGTTGGACACAAGAGAGGGCGTGAAGAACAACAGCAACAACTTAGTTCTTCTAAGCCCGTGGAGCCTGCTTCAAGAGTTTATAGAAGCTATGCTGATTTCAAAACATCATTTCAACAAGGAGAGTCTTCTTCAGTAACAGAGGAAGCAAAACCGAAAGTCACAACCACCAATCCAACTCCAGCGACCACCACCACCACTGCCGGTCCCACCACCCCATCAAGTGAGACTGGTTCATATGAAGAAGCAGGAGAAAGAAGAAGAAGATACAGAGGAGTGAGACAGAGACCGTGGGGTAAATGGGCAGCAGAAATTCGTGATCCCCACAAGGCGGCTAGAGTCTGGCTAGGAACATTTGACACTGCTGAGGCTGCAGCAAGAGCCTACGATGAAGCTGCCTTAAGATTTAGAGGTAACAGAGCAAAGCTTAATTTCCCAGAAAATGTCAGATTAGTACAACCAGTTCAAAATTTTCCAGCATCAAGGTTAGCCATTTCAGATTCTCCTACAGTCCTGTCGTCTCCAATTCAAACCCCACAGCATTTGCAGCCATCTTTTCTTCAGTCTCAAGGCTTTCAAGGGTCTTCACCTGAGTTCCTTAGGGATTTCTGGGAATATTCCCAACTGCTACAAAGCACAGGTGACTTGCATAGCCAACTGCAGCAGCAACCTTCAAGTTTTCTAGAGCAAATGTATTATAATTCACAATTGGCTTCCCTTCAATCATCCATGTTACCTCCAGCACCAGCACCAGCTCTAGCACCATCATTGTTGTCTTCATCATCTTCATTTTCCTCATTAGCTTCATATGCACCTTCTTCTTCGTCAGCCTCTGCTTCCTTTCCTTTGTTTCAACATCAGCAATTAGGTTATCCCCAAATCCAAGGAAACCCCAGTTGGAGTGGTACAAGTTCAGATTTCTCTAGTTTTCCTTGGTCAGATTCTGGCCACTATCCTCCTTCATCAAGTGGCTGA 1422 0.4613 MCLLKVANPGGSDEYVSFTAQHGGCSSTGRAGGDEEEETRSYEAHEGAAAGSSTIAHPSRQLNLQPQQQGGTGPIQNPMMFSDFSRVGEQTVMVSALTQVVSGQRGSHDEWVYRSGLPMTSGFGQIASPVLSAYSSSTSGSGAFVGSGSWVGHKRGREEQQQQLSSSKPVEPASRVYRSYADFKTSFQQGESSSVTEEAKPKVTTTNPTPATTTTTAGPTTPSSETGSYEEAGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGNRAKLNFPENVRLVQPVQNFPASRLAISDSPTVLSSPIQTPQHLQPSFLQSQGFQGSSPEFLRDFWEYSQLLQSTGDLHSQLQQQPSSFLEQMYYNSQLASLQSSMLPPAPAPALAPSLLSSSSSFSSLASYAPSSSSASASFPLFQHQQLGYPQIQGNPSWSGTSSDFSSFPWSDSGHYPPSSSG* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00419 473 PANTHER DNA-BINDING DOMAIN 196 372 IPR044808 GO:0003700|GO:0009873
Pte7g00419 473 MobiDBLite consensus disorder prediction 441 473 - -
Pte7g00419 473 Gene3D AP2/ERF domain 237 297 IPR036955 GO:0003700|GO:0006355
Pte7g00419 473 SMART rav1_2 238 301 IPR001471 GO:0003700|GO:0006355
Pte7g00419 473 FunFam Ethylene-responsive transcription factor 2 237 296 - -
Pte7g00419 473 MobiDBLite consensus disorder prediction 188 228 - -
Pte7g00419 473 ProSiteProfiles AP2/ERF domain profile. 238 295 IPR001471 GO:0003700|GO:0006355
Pte7g00419 473 MobiDBLite consensus disorder prediction 20 57 - -
Pte7g00419 473 CDD AP2 246 297 IPR001471 GO:0003700|GO:0006355
Pte7g00419 473 Pfam AP2 domain 238 287 IPR001471 GO:0003700|GO:0006355
Pte7g00419 473 MobiDBLite consensus disorder prediction 188 237 - -
Pte7g00419 473 SUPERFAMILY DNA-binding domain 238 296 IPR016177 GO:0003677
Pte7g00419 473 MobiDBLite consensus disorder prediction 148 172 - -
Pte7g00419 473 PRINTS Ethylene responsive element binding protein signature 239 250 IPR001471 GO:0003700|GO:0006355
Pte7g00419 473 PRINTS Ethylene responsive element binding protein signature 261 277 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00419 Pte-Chr7 5729823 5732860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00419 230 309 AP2-EREBP Transcription Factor Family AT2G33710 72.500 3.89e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte7g00419 AP2 9.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00419 - - qsa:O6P43_004169 338.961