Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00408 ATGTTACAGATGGAGGATTACAGACCGACATTGAGCATTTATGGAGGTGACATATATGGTCGTGAAGTGGATTTAAATGCTCCTACTGTGGTAATGGATTCTAATTGTAGCATGGCTAGCACGACCCCGGAGCCTTGTGATAGCATGGAATTTGAGTCTCATGAAGCTGCCTACTCATTCTACAAGGAATATGCCAAGTCTGTTGGTTTCGGTACTGCAAAATTAAGCAGTCGTCGATCTAGGGCTTCAAAGGAATTTATTGATGCTAAATTTTCATGCATAAGATATGGAAATAAGCAGCAATCAGATGATGCAATAAACCCTCGCCCTTCTCCAAAGATTGGTTGTAAAGCTAGCATGCATGTGAAGCGAAGACAAGATGGGAAGTGGTATATTTATAGTTTTGTGAAGGAGCACAATCATGAGCTTTTACCTGCTCAGGCTCACTTTTTCCGAAGCCACAGGGATACTGATCAAATAAAGAATGATATACGTGTAAAAAGGCGGAAAAATTTAAATGCTGCTTCCAGACTGTTTGGTGCATATCGGAATGTAGATTTTCTGGAGAGCTACATGAGAAACCAGCATGATAAAGGGAGAAAATTAGTTCTAGATGCAGGGGATGCCCAGCTGCTCCTTGATTTTTTCATGCACATGCAGGAAGAGAATCCAAAATTCTTTTATGCTATTGATTTGAATGAAGAGCACCGACTGAGAAATGTATTTTGGGTTGATGCAAAAGGCACGGAAGATTATACTCATTTTAGTGATGTTGTTTCCTTTGACACAACATATTCTGAAAATGAGTATAAAATTCCACTGGTTCTCTTTGTTGGTGTGAACCATCATATCCAACCCACATTACTGGGGTGTGCATTGGTTGCAGATGAGACAGTCTATACTTATGCTTGGTTGTTACAGACATGGTTCGTAGCAATGGGAGAAAGAGCACCACAGGTATTTCTATCTGACCAGAACAATGCCATTAAAACAGCCGTCACTGCTATTCTTCCTGGCACGCGCCATTGTTTTTGTTTGTGGCATATACTGGATAAGATTCCAAGGCAACTTGATTTAGGAATGTGGCATGACAGTTTTATGGAAAAATTCAATAAATGTATATTTAAGTCATGGACGGAAGAACAGTTTGAAAAGAGATGGTGGAAATTGGTTGAGAAGTTTAACCTTAGAGAGGTTGAATGGATTCAATCCTTGTACGAAGATCGAGTGAGATGGGTCCCAACTTTCATGAAAGGTGTATCATTCGCTGGCTTATCTGCTTCTTCACGTTCTGATAGTATCAATTCTTTGTTTGACACTTATATACGAGGGGACACTTCATTGAGAGGATTTATAGAACGATACGGGATGATCCTTGAAGATAGGTATGAAGAGGAAGCAAAAGCAAACTTCGATGCCTGGCATGATACACCAGATTTGAAATCACCTTCACCTTTTGAAAAACAAATGCTACTAGTTTACACAAATGAAATTTTCAAAAAGTTCCAAGTTGAGGTCTTGGGTGCTGCTGCTTGCCACCTCAAGAAAGAAGAAAAAGGCACAATATCAATATTTAGTGTGAAAGACTTTGAAGATAATCAGAATTATGTGGTGGAATGGAATGAATCAAACTCAGATCTTCATTGTTCTTGCCATTCATTTGAATATAAAGGATATCTCTGTAGACATGCTATCGTTGTTCTACAAATGTCTGGTGTATTTACCATCCCAACGAAGTATGTTTTGCAGAGATGGACAAATGCTGCGTTGAGCAAACGTGCTATTGGTGAAAGATTAGATGACGTGCAGTCTAAGGTTCGCCGTTTCAATGATTTGTGTCGAAGAGCCATAATATTGGGTGAAGAAGGTTCATTATCCCCAGCAAGTTACAACTTTGCTCTGGGAGCTATTAGGGATGCTTTGAAACAATGTTCAAACCTACATAACTCAATCGAAAATTATACAAGACCTAATGCCTCAATCATAGGTTCTGTTTGCAACACTGAGGAAGAGCACCAGTCAAGCAATGCATCTAACATTCACATTCGTGATGTAAATATGACTCCTAGGATCAAGGGTTCCACCGGCGGTGGGGCTGGTAAGGAGCTGAGAGATGTAGATAATAGCACAGGAAAGGAAGGGAAGATTCTTCAATTGGAGGCAATGGGTGGGCAGGATGTATATCATCACCACATGCAGGAACAAATTGCATCAAGACAGCATAACATGGTACCAATGCCTAGTGTCGCACCGACTATATTTCACAATGTTGCTTCTACGCAATATCAGAATGCAGCTTTAGCTCATTTGCATGAGAATCACCTTCCTCGGTAG 2334 0.4019 MLQMEDYRPTLSIYGGDIYGREVDLNAPTVVMDSNCSMASTTPEPCDSMEFESHEAAYSFYKEYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDAINPRPSPKIGCKASMHVKRRQDGKWYIYSFVKEHNHELLPAQAHFFRSHRDTDQIKNDIRVKRRKNLNAASRLFGAYRNVDFLESYMRNQHDKGRKLVLDAGDAQLLLDFFMHMQEENPKFFYAIDLNEEHRLRNVFWVDAKGTEDYTHFSDVVSFDTTYSENEYKIPLVLFVGVNHHIQPTLLGCALVADETVYTYAWLLQTWFVAMGERAPQVFLSDQNNAIKTAVTAILPGTRHCFCLWHILDKIPRQLDLGMWHDSFMEKFNKCIFKSWTEEQFEKRWWKLVEKFNLREVEWIQSLYEDRVRWVPTFMKGVSFAGLSASSRSDSINSLFDTYIRGDTSLRGFIERYGMILEDRYEEEAKANFDAWHDTPDLKSPSPFEKQMLLVYTNEIFKKFQVEVLGAAACHLKKEEKGTISIFSVKDFEDNQNYVVEWNESNSDLHCSCHSFEYKGYLCRHAIVVLQMSGVFTIPTKYVLQRWTNAALSKRAIGERLDDVQSKVRRFNDLCRRAIILGEEGSLSPASYNFALGAIRDALKQCSNLHNSIENYTRPNASIIGSVCNTEEEHQSSNASNIHIRDVNMTPRIKGSTGGGAGKELRDVDNSTGKEGKILQLEAMGGQDVYHHHMQEQIASRQHNMVPMPSVAPTIFHNVASTQYQNAALAHLHENHLPR* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00408 777 ProSiteProfiles Zinc finger SWIM-type profile. 536 572 IPR007527 GO:0008270
Pte7g00408 777 Pfam MULE transposase domain 258 351 IPR018289 -
Pte7g00408 777 Pfam FAR1 DNA-binding domain 59 145 IPR004330 -
Pte7g00408 777 MobiDBLite consensus disorder prediction 688 708 - -
Pte7g00408 777 Pfam SWIM zinc finger 538 570 IPR007527 GO:0008270
Pte7g00408 777 SMART 26again6 547 574 IPR006564 GO:0008270
Pte7g00408 777 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 35 646 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00408 Pte-Chr7 5487633 5492159 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pte7g00408 MULE 4.9e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00408 - - qsa:O6P43_008093 1163.29