Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00399 ATGCTTGGGGACTCAACTGTATTAGGAGCAGGCAGCTCTGCAGATGCTGCTCCAGCTGCCGCAGCAGTAACTGTTGCGACCCATGAAAGTGGTGGGGAGTCTTCATCTGTAGCTGCAGCTGCAGCTGGTGGCCATGGATCAAATTCAGGTGATGATGAAAGAGGAGGAAGAGGTCAAGAATTTGGTGATAGAAGCTACGGTGGTAACCGGTGGCCTCGTCAAGAAACGTTGGCACTCTTGAAGATACGGTCTGATATGGACGTGGCTTTCCGTGATGCCAGTGTGAAAGGTCCCTTGTGGGAAGAAGTGTCCAGGCAACTAGCAGAACTTGGTTACAACCGTAGTGCTAAGAAGTGCAGGGAGAAATTTGAGAACGTTTACAAGTATCACAAGAGAACCAAAGAAGGCCGGACCGGCAAGAGTGACGGCAAGACTTATCGGTTCTTCGATCAATTAAAAGCTCTTGAAACCAATCCATCTATGCATTCAGTGTCACCATCAAAGACAATGACTGCTGCACCAGCTATGACACCAGCAGTGACAATGGCAATGGCACCACAGCAGGCCAATACCAGTAGTCTTGCTCCTTATGATGTTGCTCATGCTACTGTTCCGTCAACCACAGCGACACCAATACCTATGACTATATCCCAAGCCATTAACAACCCATCAATGAATCTCCCATTCTCTTCATACCCATCAATTCAAAACAACCCTACAATTATTAGTCTTCCATCCTCCACAGCAAACCCTACCACAATGCCAACTTCATTATTCCAAAGCATCCCAACAGATCTTCTCTCTATTTCTACTTCTTCTTCTTCTTCTTCAACCTCATCAGATGAAGAGGTCCAAGGACAGCGCAATAAGCGGAAGAGAAAATGGAACGACTTCTTTGAGAGACTAATGAAGGAGGTGATTGGCAAGCAAGAGGATATGCAGAAGCGATTCTTGGAAGCCATCGAGAAACGTGAACGCGATCGAATGGTGAGAGAAGAAGCTTGGAGAGCGCAAGAAATGGCGAGGATCAATAGAGAGCGTGAGATTTTGTCACAAGAGAGGTCCATGGCTGGTGCTAAAGACGCAGCAGTCATGTCATTTCTGCAGAAGATAGCTGATCAGCACAATCTTGGTCAGGCATTCAGTAACGTCAATTTCGTGGCTCAAACGCAGCCACCGCCGACACAGCAACCGATACCAGTACAACAAGTAGCTAATCCGGTTCCTCCACCACCGCAGATACAGCAAGCCTTAGTCTTACCACCCCAAATGTCATCTTCGGTACCACAGCAACAGGTGACGACAAGTATTGTCTCAAATACAGAATTGCCCAATAAGACTGATAATTGTGAGCAGAATTTCTTGCCAGCGAGCTCTTCAAGATGGCCGAAGGTCGAAGTTCAAGCATTGATACAGTTACGCACCAGTTTGGATACCAAGTACCAAGATAGCGGGCCCAAAGGACCACTGTGGGAGGAAATCTCAGCAGCCATGAGAAAGCTTGGCTACAATAGGAATGCTAAAAGGTGCAAAGAGAAATGGGAGAACATCAACAAATACTTCAAGAAAGTGAAGGAGAGCAACAAGAAGAGACCAGAAGATTCTAAGACATGCCCGTATTTCCATCTCTTGGATGCTATATATAAAAAGAAGAATAAGTTTGACAACTCAGCAGCAGTGGCTGGGAAACCAGAGAGCATGATGGGCGGTGGTGCACCATTCATGGGAACATCTGAGCAGCAATGGCCACCACAGCAACAAATACTGCCGGGAACTGGACCAACAGGTCCAGGACCAGATGCGACAATGGAAGACTTGGAAAGTGAACCAGTGGAGGAACGTCACGAGGATGAGGAGGAAGAAGAAGATGAAGACAAATTATATGGAGATGATGGAGACGAAGACGAAGAAGATGAAGGAGGCAGCAACTTCGAGATAGTGCCAAGTAAACCATCTTCATCTTCAGTGAGACCAGCTGAGTGA 1983 0.469 MLGDSTVLGAGSSADAAPAAAAVTVATHESGGESSSVAAAAAGGHGSNSGDDERGGRGQEFGDRSYGGNRWPRQETLALLKIRSDMDVAFRDASVKGPLWEEVSRQLAELGYNRSAKKCREKFENVYKYHKRTKEGRTGKSDGKTYRFFDQLKALETNPSMHSVSPSKTMTAAPAMTPAVTMAMAPQQANTSSLAPYDVAHATVPSTTATPIPMTISQAINNPSMNLPFSSYPSIQNNPTIISLPSSTANPTTMPTSLFQSIPTDLLSISTSSSSSSTSSDEEVQGQRNKRKRKWNDFFERLMKEVIGKQEDMQKRFLEAIEKRERDRMVREEAWRAQEMARINREREILSQERSMAGAKDAAVMSFLQKIADQHNLGQAFSNVNFVAQTQPPPTQQPIPVQQVANPVPPPPQIQQALVLPPQMSSSVPQQQVTTSIVSNTELPNKTDNCEQNFLPASSSRWPKVEVQALIQLRTSLDTKYQDSGPKGPLWEEISAAMRKLGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHLLDAIYKKKNKFDNSAAVAGKPESMMGGGAPFMGTSEQQWPPQQQILPGTGPTGPGPDATMEDLESEPVEERHEDEEEEEDEDKLYGDDGDEDEEDEGGSNFEIVPSKPSSSSVRPAE* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00399 660 MobiDBLite consensus disorder prediction 1 69 - -
Pte7g00399 660 Pfam Myb/SANT-like DNA-binding domain 460 547 IPR044822 -
Pte7g00399 660 Pfam Myb/SANT-like DNA-binding domain 69 155 IPR044822 -
Pte7g00399 660 FunFam Trihelix transcription factor GT-2 71 132 - -
Pte7g00399 660 SMART sant 67 129 IPR001005 -
Pte7g00399 660 SMART sant 458 520 IPR001005 -
Pte7g00399 660 MobiDBLite consensus disorder prediction 605 642 - -
Pte7g00399 660 Gene3D - 462 523 - -
Pte7g00399 660 Gene3D - 71 132 - -
Pte7g00399 660 CDD GT1 69 134 - -
Pte7g00399 660 MobiDBLite consensus disorder prediction 269 283 - -
Pte7g00399 660 ProSiteProfiles Myb-like domain profile. 460 518 IPR001005 -
Pte7g00399 660 FunFam Trihelix transcription factor GT-2 462 523 - -
Pte7g00399 660 CDD GT1 460 525 - -
Pte7g00399 660 PANTHER FI21293P1 26 603 - -
Pte7g00399 660 MobiDBLite consensus disorder prediction 578 592 - -
Pte7g00399 660 MobiDBLite consensus disorder prediction 646 660 - -
Pte7g00399 660 MobiDBLite consensus disorder prediction 269 291 - -
Pte7g00399 660 ProSiteProfiles Myb-like domain profile. 63 127 IPR001005 -
Pte7g00399 660 MobiDBLite consensus disorder prediction 562 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00399 Pte-Chr7 5388996 5391950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00399 59 582 Trihelix Transcription Factor Family AT1G76880 48.785 4.19e-153 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte7g00399 Myb_DNA-bind_4 6.9e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00399 - - qsa:O6P43_004191 621.698