Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte7g00397 ATGGGTAGGAAGAAGCCTACTGCACGAGATGAAGATGTCGCTACTCAAGTTGGTGGTAAGTCTAAGAAGAAGCAACTTGTTATTGATGATGATGAGTATCTTGTCGGTACCAACCTTTCAGAAGAGCCACAGCCGGTTCAGGAAGAGAAGATTGTGATTACTGGAAAGAAGAAGGGTACTAAGGGTAATGCAAAAGGGTTATTGTTGCATGAAGAGGACGATTTCGATAAGGCGGTGGTGGAAGCTGATGCTGATGCTGTAGACGAGACTTTTTTGGATGCGAAGAAAAAGGGCAAGTCCAAAAAGGGTATCGGCAAGAGTGGGTTGAGTTCTTCGAATTTTGCATTACTTGGGGAAGAGGAAGATATCGGAGATGGAGATGATAAATCTGAGTTAACTGGCGAGAGAGATAGTGACGGTGAAGATGAAGCTGTGATGAGTTTCTCGGGGAAGAAGAAGTCGGTGAAGAGTTCAAAAAAACTTGGGGATGGTAGTTTGTTTGCTGCATCAGCTTTTGATGCCATTGGTGATGATGATGATGATGCACAGGAAGAGAGTAAGGTTGAGGATGATGAACCGGTGATTTCTTTCGCTGGAAAAAAGAAGTCATCAAAGGGTGGAAAGAAGGGCGGTAGTTCGGTTACATCGATTAGTTCTGTTGGAATTGATGAAGATGGGGACAAGGATGATAATGATAATACCGATGAACCAGTTATCTCTTTTACAGGGAAGAAAAAGTCTTCTAAGGGCAGCAAAAAAAGTGGTGGTAGTGTCTTTGCAGCTGTTAGTATCGATGCTCTTGATGAAGATGATGAGCGGGTAGAAAAGAAAGATAATGAAGATGATGATGATGCTCCTATCACCTTCTCAGGGAAGAAGAAGTCATCAAAGTTTTCGAAGAAAGGTACTACTGCTGAACTTGCTGATGATGTTAATGTTGAAGATGGATCTTCGTCGAAACCTGGTTTGGAAACTAATGACATCATTGAAGATAATGACAATTTTGGGATTGTTTTTGTCGGAAAGAAGAAAAGAACTTCCAAGAAGAAACCCACCAGTGTTTATACTGCATTGGATGATGAATCTGAGATTAGAAACGAAAACCTTGATGGCATTGGACCTGAGCAAAATGGGGAAATCAGTAAAGCTGATGCCGACAGGTTCAAAGTTAACAAGAGTGATGAAACAACTGAAGTTTCTCAAAATAAGAAGAATAAGAAGAAAAAGAGCGGGAGAACTGTCCAAGAGGAGGAGGATTTGGACAAGATTCTTGCAGAGCTTGGTGACACTCCTCGTGCTGCAAAACCTGCAGCTCCCCCTCCTCAAGAGTCGAAAGTTGAGGTGGCTTCTGAAGGAGCTGGTCCTGTTGATGCTTCTGGACAAAAAGAAGTTGAAGAAAAAGAAGATGAGACTGTTGAGTCTGCAGCTGCAAAGAAGAAGAAAAAGAAGAAGGAGAAGGAAAAGGAGAAGAAGGCAGCAGCAGCAGCAGCAGCTTCAGGTTCTGCAAATAACGATGAGAAGGAAGAAGAAATGAAAATTGAGACAGTGGAAGCAAAAAAGAATGATGGAAAGACTAAAGTGGCTGACAAGAAGCTACCCAAGCATGTTAGGGAGATGCAAGAAGCACTCGCTCGGAGAAAAGAGGCTGAAGAAAAGAAGAAAAAGGAAGAGGAGGAGAAGTTGAGGAAAGAAGAGGAGGAGAGACGAAGACAGGAGGAACTTGAGAGGCAAGCAGAAGAGGCTAGACGTAGGAAAAAGGAAAGAGAAAAGGAGAAGCTTCTAAAGAAGAAACAGGAAGGTAGATTATTAACTGGTAAGCAGAAGGAGGAAGCTCGACGTTTGGAGGCTATGAGGAAGCAGTTTCTTGCTAATGCAGGTGATGTACCGGTTACTGCTCCAGAGTTAAGCGCTCCTTCCAAAAGACCTATATATAAAACAAAGAAGTCAAAATCTAACCAGCATCAGTCAAATGGAACTACTGCCAAGGAGGTTGAAAACATAGAAGCAACAGGAAATCAGGAAGAAGAGAAAATTGAGGTGGAGTCTGAAAGAGCTGAAGATGTGGAGCTAGATAAGGTTGAAGATGTGGACTCACTTGATGTGGAGGACAACATTGAAGCTTCTGAGGCTACAGAAGATGTGATGGAAGAAGATGATGCTGAGGATGATTGGGATGCTAAGAGCTGGGATGACGTTGATCTACCATCTAAAAGTGCATTTGCTGATGAGGAGGCTGACTCCAAGCCTAAGGTTGTTGGTAAAAAGGAGGGGGTGAAGGATGCAGCACCAACGTCACGTGGTGCAGCACCTCCTCCAGTAGCCCAACCTCCAATCTCTACTAAAAAAACTGCTTCGTCTAAGAATGAGGTTCAGGAAATAAAAGATAAGAGGCAACCTGAGAGAGATGCTGCTGAGAAAAATAGAACAAAACGTCCCTCTTCAAAGAAGGAAATGTTAAATTCTGAAGCGTCTACGGAACTTAAAGAAGAATCAGGTGAGAGTGAAGTTGACCTTCGCTCTCCCATATGCTGCATAATGGGCCATGTTGACACAGGGAAAACCAAACTTCTTGATTGCATTCGAGGCACTAATGTTCAGGAAGGTGAGGCTGGAGGTATTACACAGCAGATTGGTGCCACATACTTCCCTGCTGAGAATATACGTGAGAGGACAAAAGAGCTAAAAGCTGATGCAAAACTTAAAGTCCCGGGTCTGTTGGTCATTGACACCCCAGGACATGAGTCCTTTACCAACTTGAGGTCACGTGGATCAGGCTTATGTGATATTGCGATTTTGGTTGTTGATATCATGCATGGCTTAGAGCCACAGACGATAGAATCTCTCAATCTTTTGAAAATGAGGAACACAGAGTTCATTGTTGCCTTAAATAAGGTTGATAGACTGTATGGATGGAAAACATGTCGAAATGCTCCAATCCGTAATGCAATGAAGCAACAATCGAAGGATGTCATTAATGAGTTCAATATGAGGTTGACTCAGATTATCACACAATTCAAGGAACAAGGATTAAATACAGAATTATATTATAAAAACAAAGAAATGGGAGAAACTTTCAGTATTGTGCCAACAAGTGCCATAAGTGGTGAAGGTATCCCAGATCTCCTATTGTTGTTGGTTCAGTGGACCCAAAAAACCATGGTTGAGAAGCTCACGTACAGTGATGAAGTGCAGTGTACGGTTCTGGAGGTGAAGGTCATTGAAGGCCATGGGACTACCATCGATGTTGTCTTGGTCAATGGTGTGCTTCACGAAGGAGATCAAATAGTTGTTTGTGGAATGCAGGGTCCTATTGTCACGTCTATTCGAGCTTTATTGACTCCTCATCCAATGAAGGAACTTCGGGTCAAGGGTACTTATCTTCACCATAAGGAAATCAAGGCCGCAATGGGTATTAAAATTACTGCACAGGGCCTTGAGCATGCTATTGCTGGGACTAGTCTTTATGTGGTAAGGCCTGAGGATGATTTGGATGATATAAAGGAGGAAGCTATGGAAGATATGGAGTCTGTCTTTAGTAGGATTGACAAGAGTGGTGAGGGGGTTTGTGTCCAGGCGTCTACCCTAGGTTCACTTGAAGCATTGCTTGAGTTTCTGAAGTCTCCAGCGGTAAACATACCCGTTAGTGGTATAAACATAGGCCCTGTTCATAAAAAAGATGTCATGAAGGCTGGTGTTATGCTTGAAAAGAAAAAGGAGTATGCCACGATTCTGGCATTTGATGTGAAAGTTACAACTGAAGCCCGTGAACTTGCAGATGAAATGGGTGTGAGAATTTTCCTTGCAGACATCATTTACCATTTGTTTGATCAATTTAAGGCCTACATAGACAATTTAAAGGAGGAGCGAAAGAAGGAAGCAGCAGATGAGGCTGTTTTTCCATGCGTTCTTAAAATCTTACCCAACTGCATTTTCAATAAGAAGGACCCAATTGTATTGGGTGTTGATGTTGTTGAGGGAATTGCGAAGGTAGGAACTCCGATGTGCATTCCTAGTAGGGAGTTCATTGATATTGGTCGCATTGCCTCAATTGAGGCTAATCATAAGGCTGTTGATATTGCTAAGAAAGGACAACAAGTAGCAATCAAGATACAAGGTACAAATTCTGAAGAACAACAGAAGATGTACGGAAGGCACTTTGATATCGAGGATGAACTTGTGAGTTGCATCTCGAGGAGATCCATTGATTTATTAAAAGCCAATTACAGGGATGATCTAACACTTGAGGAGTGGAAGCTGGTTGTGAAATTGAAGAGCCTTTTCAAAATCCAATGA 4293 0.4246 MGRKKPTARDEDVATQVGGKSKKKQLVIDDDEYLVGTNLSEEPQPVQEEKIVITGKKKGTKGNAKGLLLHEEDDFDKAVVEADADAVDETFLDAKKKGKSKKGIGKSGLSSSNFALLGEEEDIGDGDDKSELTGERDSDGEDEAVMSFSGKKKSVKSSKKLGDGSLFAASAFDAIGDDDDDAQEESKVEDDEPVISFAGKKKSSKGGKKGGSSVTSISSVGIDEDGDKDDNDNTDEPVISFTGKKKSSKGSKKSGGSVFAAVSIDALDEDDERVEKKDNEDDDDAPITFSGKKKSSKFSKKGTTAELADDVNVEDGSSSKPGLETNDIIEDNDNFGIVFVGKKKRTSKKKPTSVYTALDDESEIRNENLDGIGPEQNGEISKADADRFKVNKSDETTEVSQNKKNKKKKSGRTVQEEEDLDKILAELGDTPRAAKPAAPPPQESKVEVASEGAGPVDASGQKEVEEKEDETVESAAAKKKKKKKEKEKEKKAAAAAAASGSANNDEKEEEMKIETVEAKKNDGKTKVADKKLPKHVREMQEALARRKEAEEKKKKEEEEKLRKEEEERRRQEELERQAEEARRRKKEREKEKLLKKKQEGRLLTGKQKEEARRLEAMRKQFLANAGDVPVTAPELSAPSKRPIYKTKKSKSNQHQSNGTTAKEVENIEATGNQEEEKIEVESERAEDVELDKVEDVDSLDVEDNIEASEATEDVMEEDDAEDDWDAKSWDDVDLPSKSAFADEEADSKPKVVGKKEGVKDAAPTSRGAAPPPVAQPPISTKKTASSKNEVQEIKDKRQPERDAAEKNRTKRPSSKKEMLNSEASTELKEESGESEVDLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNAPIRNAMKQQSKDVINEFNMRLTQIITQFKEQGLNTELYYKNKEMGETFSIVPTSAISGEGIPDLLLLLVQWTQKTMVEKLTYSDEVQCTVLEVKVIEGHGTTIDVVLVNGVLHEGDQIVVCGMQGPIVTSIRALLTPHPMKELRVKGTYLHHKEIKAAMGIKITAQGLEHAIAGTSLYVVRPEDDLDDIKEEAMEDMESVFSRIDKSGEGVCVQASTLGSLEALLEFLKSPAVNIPVSGINIGPVHKKDVMKAGVMLEKKKEYATILAFDVKVTTEARELADEMGVRIFLADIIYHLFDQFKAYIDNLKEERKKEAADEAVFPCVLKILPNCIFNKKDPIVLGVDVVEGIAKVGTPMCIPSREFIDIGRIASIEANHKAVDIAKKGQQVAIKIQGTNSEEQQKMYGRHFDIEDELVSCISRRSIDLLKANYRDDLTLEEWKLVVKLKSLFKIQ* 1431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte7g00397 1430 FunFam Eukaryotic translation initiation factor 5B 1180 1286 - -
Pte7g00397 1430 MobiDBLite consensus disorder prediction 503 617 - -
Pte7g00397 1430 SUPERFAMILY Translation proteins 1297 1429 IPR009000 -
Pte7g00397 1430 Gene3D - 1182 1286 IPR036925 -
Pte7g00397 1430 Pfam Elongation factor Tu GTP binding domain 842 1050 IPR000795 GO:0003924|GO:0005525
Pte7g00397 1430 CDD IF2_aeIF5B_IV 1301 1396 - -
Pte7g00397 1430 PRINTS GTP-binding elongation factor signature 842 855 IPR000795 GO:0003924|GO:0005525
Pte7g00397 1430 PRINTS GTP-binding elongation factor signature 906 916 IPR000795 GO:0003924|GO:0005525
Pte7g00397 1430 PRINTS GTP-binding elongation factor signature 922 933 IPR000795 GO:0003924|GO:0005525
Pte7g00397 1430 PRINTS GTP-binding elongation factor signature 958 967 IPR000795 GO:0003924|GO:0005525
Pte7g00397 1430 Gene3D Translation factors 1061 1181 - -
Pte7g00397 1430 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1163 1292 IPR036925 -
Pte7g00397 1430 NCBIfam small GTP-binding protein domain 843 969 IPR005225 GO:0005525
Pte7g00397 1430 MobiDBLite consensus disorder prediction 649 667 - -
Pte7g00397 1430 Gene3D Translation factors 1293 1430 - -
Pte7g00397 1430 MobiDBLite consensus disorder prediction 787 833 - -
Pte7g00397 1430 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 473 1427 IPR015760 -
Pte7g00397 1430 Gene3D - 833 1060 IPR027417 -
Pte7g00397 1430 MobiDBLite consensus disorder prediction 96 159 - -
Pte7g00397 1430 Pfam Translation-initiation factor 2 1166 1279 IPR023115 -
Pte7g00397 1430 MobiDBLite consensus disorder prediction 176 328 - -
Pte7g00397 1430 Coils Coil 664 684 - -
Pte7g00397 1430 MobiDBLite consensus disorder prediction 668 691 - -
Pte7g00397 1430 MobiDBLite consensus disorder prediction 1 22 - -
Pte7g00397 1430 Coils Coil 467 497 - -
Pte7g00397 1430 MobiDBLite consensus disorder prediction 344 833 - -
Pte7g00397 1430 MobiDBLite consensus disorder prediction 266 290 - -
Pte7g00397 1430 MobiDBLite consensus disorder prediction 380 428 - -
Pte7g00397 1430 FunFam Eukaryotic translation initiation factor 5B 1293 1430 - -
Pte7g00397 1430 Coils Coil 532 598 - -
Pte7g00397 1430 CDD aeIF5B_II 1062 1172 - -
Pte7g00397 1430 CDD IF2_eIF5B 841 1051 - -
Pte7g00397 1430 FunFam Eukaryotic translation initiation factor 5B 832 1060 - -
Pte7g00397 1430 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 839 1129 IPR027417 -
Pte7g00397 1430 MobiDBLite consensus disorder prediction 729 761 - -
Pte7g00397 1430 FunFam eukaryotic translation initiation factor 5B 1061 1180 - -
Pte7g00397 1430 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 838 1054 IPR000795 GO:0003924|GO:0005525
Pte7g00397 1430 MobiDBLite consensus disorder prediction 692 728 - -
Pte7g00397 1430 Pfam Elongation factor Tu domain 2 1077 1155 IPR004161 GO:0005525
Pte7g00397 1430 MobiDBLite consensus disorder prediction 129 149 - -
Pte7g00397 1430 MobiDBLite consensus disorder prediction 354 368 - -
Pte7g00397 1430 MobiDBLite consensus disorder prediction 460 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte7g00397 Pte-Chr7 5341935 5349631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte7g00397 226 1431 Eukaryotic Initiation Factors Gene Family AT1G76810 65.274 0.0 1234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte7g00397 K03243 - gmx:100814875 1452.96